Literature DB >> 12846434

Volume registration using needle paths and point landmarks for evaluation of interventional MRI treatments.

Roee S Lazebnik1, Tanya L Lancaster, Michael S Breen, Jonathan S Lewin, David L Wilson.   

Abstract

We created a method for three-dimensional (3-D) registration of medical images (e.g., magnetic resonance imaging (MRI) or computed tomography) to images of physical tissue sections or to other medical images and evaluated its accuracy. Our method proved valuable for evaluation of animal model experiments on interventional-MRI guided thermal ablation and on a new localized drug delivery system. The method computes an optimum set of rigid body registration parameters by minimization of the Euclidean distances between automatically chosen correspondence points, along manually selected fiducial needle paths, and optional point landmarks, using the iterative closest point algorithm. For numerically simulated experiments, using two needle paths over a range of needle orientations, mean voxel displacement errors depended mostly on needle localization error when the angle between needles was at least 20 degrees. For parameters typical of our in vivo experiments, the mean voxel displacement error was < 0.35 mm. In addition, we determined that the distance objective function was a useful diagnostic for predicting registration quality. To evaluate the registration quality of physical specimens, we computed the misregistration for a needle not considered during the optimization procedure. We registered an ex vivo sheep brain MR volume with another MR volume and tissue section photographs, using various combinations of needle and point landmarks. Mean registration error was always < or = 0.54 mm for MR-to-MR registrations and < or = 0.52 mm for MR to tissue section registrations. We also applied the method to correlate MR volumes of radio-frequency induced thermal ablation lesions with actual tissue destruction. In this case, in vivo rabbit thigh volumes were registered to photographs of ex vivo tissue sections using two needle paths. Mean registration errors were between 0.7 and 1.36 mm over all rabbits, the largest error less than two MR voxel widths. We conclude that our method provides sufficient spatial correspondence to facilitate comparison of 3-D image data with data from gross pathology tissue sections and histology.

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Year:  2003        PMID: 12846434     DOI: 10.1109/TMI.2003.812246

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  9 in total

1.  Fiducial markers for combined 3-dimensional mass spectrometric and optical tissue imaging.

Authors:  Kamila Chughtai; Lu Jiang; Tiffany R Greenwood; Ivo Klinkert; Erika R Amstalden van Hove; Ron M A Heeren; Kristine Glunde
Journal:  Anal Chem       Date:  2012-02-07       Impact factor: 6.986

2.  A methodology for registration of a histological slide and in vivo MRI volume based on optimizing mutual information.

Authors:  Charles R Meyer; Bradford A Moffat; Kyle K Kuszpit; Peyton L Bland; Paul E Mckeever; Timothy D Johnson; Thomas L Chenevert; Alnawaz Rehemtulla; Brian D Ross
Journal:  Mol Imaging       Date:  2006 Jan-Mar       Impact factor: 4.488

3.  Reconstruction of 3-dimensional histology volume and its application to study mouse mammary glands.

Authors:  Rushin Shojaii; Stephanie Bacopulos; Wenyi Yang; Tigran Karavardanyan; Demetri Spyropoulos; Afshin Raouf; Anne Martel; Arun Seth
Journal:  J Vis Exp       Date:  2014-07-26       Impact factor: 1.355

4.  Ultrasound-based relative elastic modulus imaging for visualizing thermal ablation zones in a porcine model.

Authors:  Jingfeng Jiang; Chris Brace; Anita Andreano; Ryan J DeWall; Nick Rubert; Ted G Fisher; Tomy Varghese; Fred Lee; Timothy J Hall
Journal:  Phys Med Biol       Date:  2010-03-30       Impact factor: 3.609

5.  An Experimental Protocol for Assessing the Performance of New Ultrasound Probes Based on CMUT Technology in Application to Brain Imaging.

Authors:  Giulia Matrone; Alessandro Ramalli; Alessandro Stuart Savoia; Fabio Quaglia; Gloria Castellazzi; Patrizia Morbini; Marco Piastra
Journal:  J Vis Exp       Date:  2017-09-24       Impact factor: 1.355

6.  Quantitative validation of a nonlinear histology-MRI coregistration method using generalized Q-sampling imaging in complex human cortical white matter.

Authors:  Mihika Gangolli; Laurena Holleran; Joong Hee Kim; Thor D Stein; Victor Alvarez; Ann C McKee; David L Brody
Journal:  Neuroimage       Date:  2017-03-30       Impact factor: 6.556

7.  Histopathological correlates of magnetic resonance imaging-defined chronic perinatal white matter injury.

Authors:  Art Riddle; Justin Dean; Joshua R Buser; Xi Gong; Jennifer Maire; Kevin Chen; Tahir Ahmad; Victor Cai; Thuan Nguyen; Christopher D Kroenke; A Roger Hohimer; Stephen A Back
Journal:  Ann Neurol       Date:  2011-07-27       Impact factor: 10.422

8.  Voxel-based reproducibility of T2 relaxation time in patellar cartilage at 1.5 T with a new validated 3D rigid registration algorithm.

Authors:  José G Raya; Annie Horng; Olaf Dietrich; Jürgen Weber; Julia Dinges; Elisabeth Mützel; Maximilian F Reiser; Christian Glaser
Journal:  MAGMA       Date:  2009-04-01       Impact factor: 2.310

9.  Facilitating tumor functional assessment by spatially relating 3D tumor histology and in vivo MRI: image registration approach.

Authors:  Lejla Alic; Joost C Haeck; Karin Bol; Stefan Klein; Sandra T van Tiel; Piotr A Wielepolski; Marion de Jong; Wiro J Niessen; Monique Bernsen; Jifke F Veenland
Journal:  PLoS One       Date:  2011-08-29       Impact factor: 3.240

  9 in total

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