Literature DB >> 12843083

Multilocus sequence typing of Staphylococcus aureus with DNA array technology.

Willem B van Leeuwen1, Corinne Jay, Susan Snijders, Nathalia Durin, Bruno Lacroix, Henry A Verbrugh, Mark C Enright, Alain Troesch, Alex van Belkum.   

Abstract

A newly developed oligonucleotide array suited for multilocus sequence typing (MLST) of Staphylococcus aureus strains was analyzed with two strain collections in a two-center study. MLST allele identification for the first strain collection fully agreed with conventional strain typing. Analysis of strains from the second collection revealed that chip-defined MLST was concordant with conventional MLST. Array-mediated MLST data were reproducible, exchangeable, and epidemiologically concordant.

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Year:  2003        PMID： 12843083      PMCID： PMC165280          DOI： 10.1128/JCM.41.7.3323-3326.2003

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  19 in total

1.  Transcription profiling-based identification of Staphylococcus aureus genes regulated by the agr and/or sarA loci.

Authors:  P M Dunman; E Murphy; S Haney; D Palacios; G Tucker-Kellogg; S Wu; E L Brown; R J Zagursky; D Shlaes; S J Projan
Journal:  J Bacteriol       Date:  2001-12       Impact factor: 3.490

2.  Database-driven multi locus sequence typing (MLST) of bacterial pathogens.

Authors:  M S Chan; M C Maiden; B G Spratt
Journal:  Bioinformatics       Date:  2001-11       Impact factor: 6.937

3.  Whole genome sequencing of meticillin-resistant Staphylococcus aureus.

Authors:  M Kuroda; T Ohta; I Uchiyama; T Baba; H Yuzawa; I Kobayashi; L Cui; A Oguchi; K Aoki; Y Nagai; J Lian; T Ito; M Kanamori; H Matsumaru; A Maruyama; H Murakami; A Hosoyama; Y Mizutani-Ui; N K Takahashi; T Sawano; R Inoue; C Kaito; K Sekimizu; H Hirakawa; S Kuhara; S Goto; J Yabuzaki; M Kanehisa; A Yamashita; K Oshima; K Furuya; C Yoshino; T Shiba; M Hattori; N Ogasawara; H Hayashi; K Hiramatsu
Journal:  Lancet       Date:  2001-04-21       Impact factor: 79.321

4.  The evolution of methicillin resistance in Staphylococcus aureus: similarity of genetic backgrounds in historically early methicillin-susceptible and -resistant isolates and contemporary epidemic clones.

Authors:  M I Crisóstomo; H Westh; A Tomasz; M Chung; D C Oliveira; H de Lencastre
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

5.  Evaluation of protein A gene polymorphic region DNA sequencing for typing of Staphylococcus aureus strains.

Authors:  B Shopsin; M Gomez; S O Montgomery; D H Smith; M Waddington; D E Dodge; D A Bost; M Riehman; S Naidich; B N Kreiswirth
Journal:  J Clin Microbiol       Date:  1999-11       Impact factor: 5.948

6.  Usefulness of multilocus sequence typing for characterization of clinical isolates of Candida albicans.

Authors:  M-E Bougnoux; S Morand; C d'Enfert
Journal:  J Clin Microbiol       Date:  2002-04       Impact factor: 5.948

7.  Genome and virulence determinants of high virulence community-acquired MRSA.

Authors:  Tadashi Baba; Fumihiko Takeuchi; Makoto Kuroda; Harumi Yuzawa; Ken-ichi Aoki; Akio Oguchi; Yoshimi Nagai; Natsuko Iwama; Kazuyuki Asano; Timothy Naimi; Hiroko Kuroda; Longzhu Cui; Kenji Yamamoto; Keiichi Hiramatsu
Journal:  Lancet       Date:  2002-05-25       Impact factor: 79.321

Review 8.  Using DNA microarrays to study host-microbe interactions.

Authors:  C A Cummings; D A Relman
Journal:  Emerg Infect Dis       Date:  2000 Sep-Oct       Impact factor: 6.883

9.  Intercenter reproducibility of binary typing for Staphylococcus aureus.

Authors:  Willem B van Leeuwen; Sandor Snoeijers; Christel van der Werken-Libregts; Anita Tuip; Anneke van der Zee; Diane Egberink; Monique de Proost; Elisabeth Bik; Bjorn Lunter; Jan Kluytmans; Etty Gits; Inge van Duyn; Max Heck; Kim van der Zwaluw; Wim Wannet; Gerda T Noordhoek; Sije Mulder; Nicole Renders; Miranda Boers; Sebastiaan Zaat; Daniëlle van der Riet; Mirjam Kooistra; Adriaan Talens; Lenie Dijkshoorn; Tanny van der Reyden; Dick Veenendaal; Nancy Bakker; Barry Cookson; Alisson Lynch; Wolfgang Witte; Christa Cuny; Dominique Blanc; Isabelle Vernez; Waleria Hryniewicz; Janusz Fiett; Marc Struelens; Ariane Deplano; Jim Landegent; Henri A Verbrugh; Alex van Belkum
Journal:  J Microbiol Methods       Date:  2002-09       Impact factor: 2.363

10.  Multilocus sequence typing for characterization of methicillin-resistant and methicillin-susceptible clones of Staphylococcus aureus.

Authors:  M C Enright; N P Day; C E Davies; S J Peacock; B G Spratt
Journal:  J Clin Microbiol       Date:  2000-03       Impact factor: 5.948
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  18 in total

1.  Identification of Campylobacter jejuni multilocus sequence type ST-21 clonal complex by single-nucleotide polymorphism analysis.

Authors:  E L Best; A J Fox; J A Frost; F J Bolton
Journal:  J Clin Microbiol       Date:  2004-06       Impact factor: 5.948

Review 2.  Multilocus sequence typing: Data analysis in clinical microbiology and public health.

Authors:  Christopher B Sullivan; Matthew A Diggle; Stuart C Clarke
Journal:  Mol Biotechnol       Date:  2005-03       Impact factor: 2.695

3.  Recognition of SCCmec types according to typing pattern determined by multienzyme multiplex PCR-amplified fragment length polymorphism analysis of methicillin-resistant Staphylococcus aureus.

Authors:  Anneke van der Zee; Max Heck; Marcel Sterks; Airien Harpal; Emile Spalburg; Leonard Kazobagora; Wim Wannet
Journal:  J Clin Microbiol       Date:  2005-12       Impact factor: 5.948

4.  Clonal distribution and differential occurrence of the enterotoxin gene cluster, egc, in carriage- versus bacteremia-associated isolates of Staphylococcus aureus.

Authors:  Alex van Belkum; Damian C Melles; Susan V Snijders; Willem B van Leeuwen; Heiman F L Wertheim; Jan L Nouwen; Henri A Verbrugh; Jerome Etienne
Journal:  J Clin Microbiol       Date:  2006-04       Impact factor: 5.948

5.  Analysis of the genetic variability of virulence-related loci in epidemic clones of methicillin-resistant Staphylococcus aureus.

Authors:  A R Gomes; S Vinga; M Zavolan; H de Lencastre
Journal:  Antimicrob Agents Chemother       Date:  2005-01       Impact factor: 5.191

6.  Host- and tissue-specific pathogenic traits of Staphylococcus aureus.

Authors:  Willem B van Leeuwen; Damian C Melles; Alwaleed Alaidan; Mohammed Al-Ahdal; Hélène A M Boelens; Susan V Snijders; Heiman Wertheim; Engeline van Duijkeren; Justine K Peeters; Peter J van der Spek; Roy Gorkink; Guus Simons; Henri A Verbrugh; Alex van Belkum
Journal:  J Bacteriol       Date:  2005-07       Impact factor: 3.490

Review 7.  Basic concepts of microarrays and potential applications in clinical microbiology.

Authors:  Melissa B Miller; Yi-Wei Tang
Journal:  Clin Microbiol Rev       Date:  2009-10       Impact factor: 26.132

8.  Natural population dynamics and expansion of pathogenic clones of Staphylococcus aureus.

Authors:  Damian C Melles; Raymond F J Gorkink; Hélène A M Boelens; Susan V Snijders; Justine K Peeters; Michael J Moorhouse; Peter J van der Spek; Willem B van Leeuwen; Guus Simons; Henri A Verbrugh; Alex van Belkum
Journal:  J Clin Invest       Date:  2004-12       Impact factor: 14.808

9.  DNA probe array for the simultaneous identification of herpesviruses, enteroviruses, and flaviviruses.

Authors:  Jehanara Korimbocus; Noël Scaramozzino; Bruno Lacroix; Jean Marc Crance; Daniel Garin; Guy Vernet
Journal:  J Clin Microbiol       Date:  2005-08       Impact factor: 5.948

10.  High-throughput typing of Staphylococcus aureus by amplified fragment length polymorphism (AFLP) or multi-locus variable number of tandem repeat analysis (MLVA) reveals consistent strain relatedness.

Authors:  D C Melles; L Schouls; P François; S Herzig; H A Verbrugh; A van Belkum; J Schrenzel
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2008-07-29       Impact factor: 3.267
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