Literature DB >> 12842467

The crystal structure of AF1521 a protein from Archaeoglobus fulgidus with homology to the non-histone domain of macroH2A.

Mark D Allen1, Ashley M Buckle, Suzanne C Cordell, Jan Löwe, Mark Bycroft.   

Abstract

MacroH2A is an unusual histone H2A variant that has an extensive C-terminal tail that comprises approximately two thirds of the protein. The C-terminal non-histone domain of macroH2A is also found in a number of other proteins and has been termed the macro domain. Here we report the crystal structure to 1.7A of AF1521, a protein consisting of a stand-alone macro domain from Archaeoglobus fulgidus. The structure has a mixed alpha/beta fold that closely resembles the N-terminal DNA binding domain of the Escherichia coli leucine aminopeptidase PepA. The structure also shows some similarity to members of the P-loop family of nucleotide hydrolases.

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Year:  2003        PMID: 12842467     DOI: 10.1016/s0022-2836(03)00473-x

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  57 in total

1.  The macro domain is an ADP-ribose binding module.

Authors:  Georgios I Karras; Georg Kustatscher; Heeran R Buhecha; Mark D Allen; Céline Pugieux; Fiona Sait; Mark Bycroft; Andreas G Ladurner
Journal:  EMBO J       Date:  2005-05-19       Impact factor: 11.598

2.  Structural characterization of the histone variant macroH2A.

Authors:  Srinivas Chakravarthy; Sampath Kumar Y Gundimella; Cecile Caron; Pierre-Yves Perche; John R Pehrson; Saadi Khochbin; Karolin Luger
Journal:  Mol Cell Biol       Date:  2005-09       Impact factor: 4.272

3.  The histone variant mH2A1.1 interferes with transcription by down-regulating PARP-1 enzymatic activity.

Authors:  Khalid Ouararhni; Réda Hadj-Slimane; Slimane Ait-Si-Ali; Philippe Robin; Flore Mietton; Annick Harel-Bellan; Stefan Dimitrov; Ali Hamiche
Journal:  Genes Dev       Date:  2006-12-01       Impact factor: 11.361

4.  Mechanism of polymerase II transcription repression by the histone variant macroH2A.

Authors:  Cécile-Marie Doyen; Woojin An; Dimitar Angelov; Vladimir Bondarenko; Flore Mietton; Vassily M Studitsky; Ali Hamiche; Robert G Roeder; Philippe Bouvet; Stefan Dimitrov
Journal:  Mol Cell Biol       Date:  2006-02       Impact factor: 4.272

5.  macroH2A1 histone variants are depleted on active genes but concentrated on the inactive X chromosome.

Authors:  Lakshmi N Changolkar; John R Pehrson
Journal:  Mol Cell Biol       Date:  2006-06       Impact factor: 4.272

6.  Developmental changes in histone macroH2A1-mediated gene regulation.

Authors:  Lakshmi N Changolkar; Carl Costanzi; N Adrian Leu; Dannee Chen; K John McLaughlin; John R Pehrson
Journal:  Mol Cell Biol       Date:  2007-01-22       Impact factor: 4.272

Review 7.  Chromatin disassembly and reassembly during DNA repair.

Authors:  Jeffrey G Linger; Jessica K Tyler
Journal:  Mutat Res       Date:  2007-01-21       Impact factor: 2.433

8.  Crystal structures of two coronavirus ADP-ribose-1''-monophosphatases and their complexes with ADP-Ribose: a systematic structural analysis of the viral ADRP domain.

Authors:  Yuanyuan Xu; Le Cong; Cheng Chen; Lei Wei; Qi Zhao; Xiaoling Xu; Yanlin Ma; Mark Bartlam; Zihe Rao
Journal:  J Virol       Date:  2008-11-05       Impact factor: 5.103

9.  Computational and single-molecule force studies of a macro domain protein reveal a key molecular determinant for mechanical stability.

Authors:  Dora L Guzmán; Arlo Randall; Pierre Baldi; Zhibin Guan
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-13       Impact factor: 11.205

10.  Identification of a Ca2+-binding domain in the rubella virus nonstructural protease.

Authors:  Yubin Zhou; Wen-Pin Tzeng; Wei Yang; Yumei Zhou; Yiming Ye; Hsiau-wei Lee; Teryl K Frey; Jenny Yang
Journal:  J Virol       Date:  2007-05-02       Impact factor: 5.103

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