Literature DB >> 12836013

Construction and application of a bacterial artificial chromosome (BAC) library of Prunus armeniaca L. for the identification of clones linked to the self-incompatibility locus.

S Vilanova1, C Romero, D Abernathy, A G Abbott, L Burgos, G Llacer, M L Badenes.   

Abstract

To facilitate gene discovery in the Rosaceae, a bacterial artificial chromosome (BAC) library was constructed using high-molecular-weight (HMW) DNA from apricot leaves (Prunus armeniaca L.). The library contains 101,376 clones (264, 384-well plates) with an average insert size of 64 kb, equivalent to 22-fold genome coverage. In the first application of this library, high-density filters were screened for self-incompatibility genes using apricot DNA probes. Eight positive BAC clones were detected and fingerprinted to determine clone relationships and assemble contigs. These results demonstrate the suitability of this library for gene identification and physical mapping of the apricot genome.

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Year:  2003        PMID： 12836013     DOI： 10.1007/s00438-003-0874-7

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN： 1617-4623            Impact factor:   2.980


  23 in total

1.  The male determinant of self-incompatibility in Brassica.

Authors:  C R Schopfer; M E Nasrallah; J B Nasrallah
Journal:  Science       Date:  1999-11-26       Impact factor: 47.728

2.  A peach linkage map integrating RFLPs, SSRs, RAPDs, and morphological markers.

Authors:  M T Dettori; R Quarta; I Verde
Journal:  Genome       Date:  2001-10       Impact factor: 2.166

3.  An expanded genetic linkage map of Prunus based on an interspecific cross between almond and peach.

Authors:  F A Bliss; S Arulsekar; M R Foolad; V Becerra; A M Gillen; M L Warburton; A M Dandekar; G M Kocsisne; K K Mydin
Journal:  Genome       Date:  2002-06       Impact factor: 2.166

4.  A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.

Authors:  A P Feinberg; B Vogelstein
Journal:  Anal Biochem       Date:  1983-07-01       Impact factor: 3.365

5.  The pollen determinant of self-incompatibility in Brassica campestris.

Authors:  S Takayama; H Shiba; M Iwano; H Shimosato; F S Che; N Kai; M Watanabe; G Suzuki; K Hinata; A Isogai
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-15       Impact factor: 11.205

6.  Construction of a BAC library and its application to the identification of simple sequence repeats in peach [ Prunus persica (L.) Batsch].

Authors:  L. Georgi; Y. Wang; D. Yvergniaux; T. Ormsbee; M. Iñigo; G. Reighard; G. Abbott
Journal:  Theor Appl Genet       Date:  2002-09-04       Impact factor: 5.699

7.  Characterization of the S-locus region of almond (Prunus dulcis): analysis of a somaclonal mutant and a cosmid contig for an S haplotype.

Authors:  K Ushijima; H Sassa; M Tamura; M Kusaba; R Tao; T M Gradziel; A M Dandekar; H Hirano
Journal:  Genetics       Date:  2001-05       Impact factor: 4.562

8.  The S-locus of Nicotiana alata: genomic organization and sequence analysis of two S-RNase alleles.

Authors:  D P Matton; S L Mau; S Okamoto; A E Clarke; E Newbigin
Journal:  Plant Mol Biol       Date:  1995-08       Impact factor: 4.076

9.  Construction and characterization of a bacterial artificial chromosome library of Sorghum bicolor.

Authors:  S S Woo; J Jiang; B S Gill; A H Paterson; R A Wing
Journal:  Nucleic Acids Res       Date:  1994-11-25       Impact factor: 16.971

10.  An apricot (Prunus armeniaca L.) F2 progeny linkage map based on SSR and AFLP markers, mapping plum pox virus resistance and self-incompatibility traits.

Authors:  S Vilanova; C Romero; A G Abbott; G Llácer; M L Badenes
Journal:  Theor Appl Genet       Date:  2003-03-14       Impact factor: 5.574
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  6 in total

Review 1.  Multiple models for Rosaceae genomics.

Authors:  Vladimir Shulaev; Schuyler S Korban; Bryon Sosinski; Albert G Abbott; Herb S Aldwinckle; Kevin M Folta; Amy Iezzoni; Dorrie Main; Pere Arús; Abhaya M Dandekar; Kim Lewers; Susan K Brown; Thomas M Davis; Susan E Gardiner; Daniel Potter; Richard E Veilleux
Journal:  Plant Physiol       Date:  2008-05-16       Impact factor: 8.340

2.  Self-compatibility of two apricot selections is associated with two pollen-part mutations of different nature.

Authors:  Santiago Vilanova; María Luisa Badenes; Lorenzo Burgos; José Martínez-Calvo; Gerardo Llácer; Carlos Romero
Journal:  Plant Physiol       Date:  2006-08-18       Impact factor: 8.340

3.  Analysis of the S-locus structure in Prunus armeniaca L. Identification of S-haplotype specific S-RNase and F-box genes.

Authors:  C Romero; S Vilanova; L Burgos; J Martínez-Calvo; M Vicente; G Llácer; M L Badenes
Journal:  Plant Mol Biol       Date:  2004-09       Impact factor: 4.076

4.  Physical mapping of a pollen modifier locus controlling self-incompatibility in apricot and synteny analysis within the Rosaceae.

Authors:  Elena Zuriaga; Laura Molina; María Luisa Badenes; Carlos Romero
Journal:  Plant Mol Biol       Date:  2012-04-06       Impact factor: 4.076

5.  Genomic analysis reveals MATH gene(s) as candidate(s) for Plum pox virus (PPV) resistance in apricot (Prunus armeniaca L.).

Authors:  Elena Zuriaga; José Miguel Soriano; Tetyana Zhebentyayeva; Carlos Romero; Chris Dardick; Joaquín Cañizares; Maria Luisa Badenes
Journal:  Mol Plant Pathol       Date:  2013-05-14       Impact factor: 5.663

6.  A disulfide bond A-like oxidoreductase is a strong candidate gene for self-incompatibility in apricot (Prunus armeniaca) pollen.

Authors:  Juan Vicente Muñoz-Sanz; Elena Zuriaga; María L Badenes; Carlos Romero
Journal:  J Exp Bot       Date:  2017-11-02       Impact factor: 6.992
  6 in total

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