Literature DB >> 12833667

Integration of data and methods for genome analysis.

Patrick Durand1, Claudine Médigue, Anne Morgat, Yves Vandenbrouck, Alain Viari, François Rechenmann.   

Abstract

The development of genomic and post-genomic technologies has created an explosion in the quantity, diversity and availability of both biological data and methods of analysis. Biologists are currently facing the problem of using all these resources to convert raw data into new valuable knowledge. This review presents software platforms designed to handle data and/or methods in the context of genome analysis.

Mesh:

Year:  2003        PMID: 12833667

Source DB:  PubMed          Journal:  Curr Opin Drug Discov Devel        ISSN: 1367-6733


  4 in total

1.  AMIGene: Annotation of MIcrobial Genes.

Authors:  Stéphanie Bocs; Stéphane Cruveiller; David Vallenet; Grégory Nuel; Claudine Médigue
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

2.  Comparative genomic analysis of three strains of Ehrlichia ruminantium reveals an active process of genome size plasticity.

Authors:  Roger Frutos; Alain Viari; Conchita Ferraz; Anne Morgat; Sophie Eychenié; Yane Kandassamy; Isabelle Chantal; Albert Bensaid; Eric Coissac; Nathalie Vachiery; Jacques Demaille; Dominique Martinez
Journal:  J Bacteriol       Date:  2006-04       Impact factor: 3.490

3.  GenoLink: a graph-based querying and browsing system for investigating the function of genes and proteins.

Authors:  Patrick Durand; Laurent Labarre; Alain Meil; Jean-Louis Divo; Yves Vandenbrouck; Alain Viari; Jérôme Wojcik
Journal:  BMC Bioinformatics       Date:  2006-01-17       Impact factor: 3.169

4.  Genepi: a blackboard framework for genome annotation.

Authors:  Stéphane Descorps-Declère; Danielle Ziébelin; François Rechenmann; Alain Viari
Journal:  BMC Bioinformatics       Date:  2006-10-12       Impact factor: 3.169

  4 in total

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