Literature DB >> 12825620

AstexViewer: a visualisation aid for structure-based drug design.

Michael J Hartshorn1.   

Abstract

AstexViewer is a Java molecular graphics program that can be used for visualisation in many aspects of structure-based drug design. This paper describes its functionality, implementation and examples of its use. The program can run as an Applet in a web browser allowing structures to be displayed without installing additional software. Applications of its use are described for visualisation and as part of a structure based design platform. The software is being made freely available to the community and may be downloaded from http://www.astex-technology.com/AstexViewer.

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Year:  2002        PMID： 12825620     DOI： 10.1023/a:1023813504011

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN： 0920-654X            Impact factor:   3.686


  60 in total

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Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

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Journal:  J Comput Aided Mol Des       Date:  2015-02-10       Impact factor: 3.686

Review 3.  Data deposition and annotation at the worldwide protein data bank.

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Journal:  Mol Biotechnol       Date:  2008-12-10       Impact factor: 2.695

4.  PredHS: a web server for predicting protein-protein interaction hot spots by using structural neighborhood properties.

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Journal:  Nucleic Acids Res       Date:  2014-05-22       Impact factor: 16.971

Review 5.  Protein structure databases.

Authors:  Roman A Laskowski
Journal:  Mol Biotechnol       Date:  2011-06       Impact factor: 2.695

6.  Aquaria: simplifying discovery and insight from protein structures.

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Journal:  Nat Methods       Date:  2015-02       Impact factor: 28.547

7.  Functional inferences of environmental coccolithovirus biodiversity.

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Journal:  Virol Sin       Date:  2013-08-28       Impact factor: 4.327

8.  DUFs: families in search of function.

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Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-03-05

9.  The Protein Model Portal.

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Journal:  J Struct Funct Genomics       Date:  2008-11-27

10.  Solution NMR structures of proteins VPA0419 from Vibrio parahaemolyticus and yiiS from Shigella flexneri provide structural coverage for protein domain family PFAM 04175.

Authors:  Kiran Kumar Singarapu; Jeffrey L Mills; Rong Xiao; Thomas Acton; Marco Punta; Markus Fischer; Barry Honig; Burkhard Rost; Gaetano T Montelione; Thomas Szyperski
Journal:  Proteins       Date:  2010-02-15
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