Literature DB >> 12821325

Agmatine deiminase from cucumber seedlings is a mono-specific enzyme: purification and characteristics.

Yoko Sakakibara1, Hiroshi Yanagisawa.   

Abstract

Agmatine deiminase was purified to homogeneity from cucumber seedlings. The purification procedures included treatment with DE52, ammonium sulfate precipitation, DE52 column chromatography, Superdex 200 column chromatography, and agmatine-(CNBr)-diaminohexane-CNBr-activated-Sepharose 4B column chromatography. The purified agmatine deiminase exhibited a specific activity of 242nkat/mg protein at 30 degrees C, pH 7.0, with a yield of 33%. The molecular mass of the native enzyme was 67kDa, as estimated by Superdex 200 column chromatography. On the other hand, SDS-PAGE showed that the molecular masses of the subunits with 1% SDS and 5% of 2-mercaptoethanol treatment and with additional N-glycosidase F treatment were 47 and 36kDa, respectively. These results suggest that agmatine deiminase from cucumber is a glycoprotein. The Km of the enzyme for agmatine was 16microM and arcaine was a potent competitive inhibitor of the enzyme, with a Ki of 7.1microM. The enzyme was stable for 2 months at 4 degrees C. The enzyme does not have putrescine synthase activity or the activities of its components ornithine and putrescine transcarbamylase. The characteristics of the enzyme purified from cucumber were like those of the enzyme from maize. These results indicate that agmatine deiminase is distinctly different from putrescine synthase in higher plants.

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Year:  2003        PMID: 12821325     DOI: 10.1016/s1046-5928(03)00071-8

Source DB:  PubMed          Journal:  Protein Expr Purif        ISSN: 1046-5928            Impact factor:   1.650


  5 in total

1.  The gene cluster for agmatine catabolism of Enterococcus faecalis: study of recombinant putrescine transcarbamylase and agmatine deiminase and a snapshot of agmatine deiminase catalyzing its reaction.

Authors:  José L Llácer; Luis Mariano Polo; Sandra Tavárez; Benito Alarcón; Rebeca Hilario; Vicente Rubio
Journal:  J Bacteriol       Date:  2006-10-06       Impact factor: 3.490

2.  Regulation and physiologic significance of the agmatine deiminase system of Streptococcus mutans UA159.

Authors:  Ann R Griswold; Max Jameson-Lee; Robert A Burne
Journal:  J Bacteriol       Date:  2006-02       Impact factor: 3.490

3.  Mechanistic studies of agmatine deiminase from multiple bacterial species.

Authors:  Justin E Jones; Christina J Dreyton; Heather Flick; Corey P Causey; Paul R Thompson
Journal:  Biochemistry       Date:  2010-11-02       Impact factor: 3.162

4.  Listeria monocytogenes aguA1, but not aguA2, encodes a functional agmatine deiminase: biochemical characterization of its catalytic properties and roles in acid tolerance.

Authors:  Changyong Cheng; Jianshun Chen; Chun Fang; Ye Xia; Ying Shan; Yuan Liu; Guilan Wen; Houhui Song; Weihuan Fang
Journal:  J Biol Chem       Date:  2013-08-05       Impact factor: 5.157

Review 5.  Progress toward understanding the contribution of alkali generation in dental biofilms to inhibition of dental caries.

Authors:  Ya-Ling Liu; Marcelle Nascimento; Robert A Burne
Journal:  Int J Oral Sci       Date:  2012-09-21       Impact factor: 6.344

  5 in total

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