Literature DB >> 12820896

Dynamics in the Mn2+ binding site in single crystals of concanavalin A revealed by high-field EPR spectroscopy.

Raanan Carmieli1, Palanichamy Manikandan, Boris Epel, A Joseph Kalb, Alexander Schnegg, Anton Savitsky, Klaus Möbius, Daniella Goldfarb.   

Abstract

EPR spectroscopy at 95 GHz was used to characterize the dynamics at the Mn(2+) binding site in single crystals of the saccharide-binding protein concanavalin A. The zero-field splitting (ZFS) tensor of the Mn(2+) was determined from rotation patterns in the a-c and a-b crystallographic planes, acquired at room temperature and 4.5 K. The analysis of the rotation patterns showed that while at room temperature there is only one type of Mn(2+) site, at low temperatures two types of Mn(2+) sites, not related by any symmetry, are distinguished. The sites differ in the ZFS parameters D and E and in the orientation of the ZFS tensor with respect to the crystallographic axes. Temperature-dependent EPR measurements on a crystal oriented with its crystallographic a axis parallel to the magnetic field showed that as the temperature increases, the two well-resolved Mn(2+) sextets gradually coalesce into a single sextet at room temperature. The line shape changes are characteristic of a two-site exchange. This was confirmed by simulations which gave rates in the range of 10(7)-10(8) s(-1) for the temperature range of 200-266 K and an activation energy of 23.8 kJ/mol. This dynamic process was attributed to a conformational equilibrium within the Mn(2+) binding site which freezes into two conformations at low temperatures.

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Year:  2003        PMID: 12820896     DOI: 10.1021/bi034281+

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  3 in total

1.  The 15-K neutron structure of saccharide-free concanavalin A.

Authors:  M P Blakeley; A J Kalb; J R Helliwell; D A A Myles
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-03       Impact factor: 11.205

2.  Responses of Mn2+ speciation in Deinococcus radiodurans and Escherichia coli to γ-radiation by advanced paramagnetic resonance methods.

Authors:  Ajay Sharma; Elena K Gaidamakova; Vera Y Matrosova; Brian Bennett; Michael J Daly; Brian M Hoffman
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-27       Impact factor: 11.205

3.  The catalytic Mn2+ sites in the enolase-inhibitor complex: crystallography, single-crystal EPR, and DFT calculations.

Authors:  Raanan Carmieli; Todd M Larsen; George H Reed; Samir Zein; Frank Neese; Daniella Goldfarb
Journal:  J Am Chem Soc       Date:  2007-03-17       Impact factor: 15.419

  3 in total

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