Literature DB >> 1280147

Direct automated sequencing of 16S rDNA amplified by polymerase chain reaction from bacterial cultures without DNA purification.

A Hiraishi1.   

Abstract

The 16S rRNA gene from various bacterial cultures was amplified by the polymerase chain reaction without DNA purification, and sequenced directly by using a laser fluorescent DNA sequencer and Tth polymerase with a cycle sequencing protocol. The described procedures provide almost complete 16S rDNA sequence data within a couple of days and facilitate systematic studies.

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Year:  1992        PMID: 1280147     DOI: 10.1111/j.1472-765x.1992.tb00765.x

Source DB:  PubMed          Journal:  Lett Appl Microbiol        ISSN: 0266-8254            Impact factor:   2.858


  83 in total

1.  Characterization of blood culture isolates of Streptococcus dysgalactiae subsp. equisimilis possessing Lancefield's group A antigen.

Authors:  C M Brandt; G Haase; N Schnitzler; R Zbinden; R Lütticken
Journal:  J Clin Microbiol       Date:  1999-12       Impact factor: 5.948

2.  Growth stimulation of iodide-oxidizing α-Proteobacteria in iodide-rich environments.

Authors:  Yumi Arakawa; Yukako Akiyama; Hideharu Furukawa; Wataru Suda; Seigo Amachi
Journal:  Microb Ecol       Date:  2011-12-03       Impact factor: 4.552

3.  Antimicrobial susceptibility of clinically relevant Gram-positive anaerobic cocci collected over a three-year period in the Netherlands.

Authors:  A C M Veloo; G W Welling; J E Degener
Journal:  Antimicrob Agents Chemother       Date:  2010-12-28       Impact factor: 5.191

4.  Rapid identification of clinically relevant Enterococcus species by fluorescence in situ hybridization.

Authors:  Nele Wellinghausen; Melanie Bartel; Andreas Essig; Sven Poppert
Journal:  J Clin Microbiol       Date:  2007-08-01       Impact factor: 5.948

5.  fbl gene as a species-specific target for Staphylococcus lugdunensis identification.

Authors:  Kalliopi-Stavroula Chatzigeorgiou; Nikolaos Siafakas; Efthymia Petinaki; Loukia Zerva
Journal:  J Clin Lab Anal       Date:  2010       Impact factor: 2.352

6.  Diversity, localization, and physiological properties of filamentous microbes belonging to Chloroflexi subphylum I in mesophilic and thermophilic methanogenic sludge granules.

Authors:  Takeshi Yamada; Yuji Sekiguchi; Hiroyuki Imachi; Yoichi Kamagata; Akiyoshi Ohashi; Hideki Harada
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

7.  Selective phylogenetic analysis targeted at 16S rRNA genes of thermophiles and hyperthermophiles in deep-subsurface geothermal environments.

Authors:  Hiroyuki Kimura; Maki Sugihara; Kenji Kato; Satoshi Hanada
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

8.  Role of alpha-methylacyl coenzyme A racemase in the degradation of methyl-branched alkanes by Mycobacterium sp. strain P101.

Authors:  Yasuyoshi Sakai; Hironori Takahashi; Yuori Wakasa; Tetsuya Kotani; Hiroya Yurimoto; Nobuya Miyachi; Paul P Van Veldhoven; Nobuo Kato
Journal:  J Bacteriol       Date:  2004-11       Impact factor: 3.490

9.  Rapid identification of staphylococcal strains from positive-testing blood culture bottles by internal transcribed spacer PCR followed by microchip gel electrophoresis.

Authors:  Shin-Ichi Fujita; Yasuko Senda; Thikako Iwagami; Takuma Hashimoto
Journal:  J Clin Microbiol       Date:  2005-03       Impact factor: 5.948

10.  Characterization of clinical Enterococcus faecalis small-colony variants.

Authors:  Nele Wellinghausen; Indranil Chatterjee; Anja Berger; Andrea Niederfuehr; Richard A Proctor; Barbara C Kahl
Journal:  J Clin Microbiol       Date:  2009-07-15       Impact factor: 5.948

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