Literature DB >> 12800252

Gene-expression analysis of single cells-nested polymerase chain reaction after laser microdissection.

Xin Shi1, Jörg Kleeff, Zhao-Wen Zhu, Bruno Schmied, Wen-Hao Tang, Arthur Zimmermann, Markus W Buchler, Helmut Friess.   

Abstract

AIM: The structural and functional characteristics of cells are dependent on the specific gene expression profile. The ability to study and compare gene expression at the cellular level will therefore provide valuable insights into cell physiology and pathophysiology.
METHODS: Individual cells were isolated from frozen colon tissue sections using laser microdissection. DNA as well as RNA were extracted, and total RNA was reversely transcribed to complementary DNA (cDNA). Both DNA and cDNA were analyzed by nested polymerase chain reaction (PCR). The quality of isolated DNA and RNA was satisfactory.
RESULTS: Single cells were successfully microdissected using an ultraviolet laser micromanipulator. Nested PCR amplification products of DNA and cDNA of single cells could clearly be visualized by agarose gel electrophoresis.
CONCLUSION: The combined use of laser microdissection and nested-PCR provides an opportunity to analyze gene expression in single cells. This method allows the analysis and identification of specific genes which are involved in physiological and pathophysiological processes in a complex of variable cell phenotypes.

Entities:  

Mesh:

Year:  2003        PMID: 12800252      PMCID: PMC4611812          DOI: 10.3748/wjg.v9.i6.1337

Source DB:  PubMed          Journal:  World J Gastroenterol        ISSN: 1007-9327            Impact factor:   5.742


  30 in total

Review 1.  Gene-expression analysis at the single-cell level.

Authors:  A K Dixon; P J Richardson; R D Pinnock; K Lee
Journal:  Trends Pharmacol Sci       Date:  2000-02       Impact factor: 14.819

2.  Analysis of anterior pituitary hormone mRNA expression in immunophenotypically characterized single cells after laser capture microdissection.

Authors:  L Jin; C A Thompson; X Qian; S J Kuecker; E Kulig; R V Lloyd
Journal:  Lab Invest       Date:  1999-04       Impact factor: 5.662

3.  Practical histological microdissection for PCR analysis.

Authors:  J J Going; R F Lamb
Journal:  J Pathol       Date:  1996-05       Impact factor: 7.996

4.  Polymerase chain reaction microanalysis of tumors from stained histological slides.

Authors:  L Whetsell; G Maw; N Nadon; D P Ringer; F V Schaefer
Journal:  Oncogene       Date:  1992-11       Impact factor: 9.867

5.  Syndecan-1 expression is up-regulated in pancreatic but not in other gastrointestinal cancers.

Authors:  J R Conejo; J Kleeff; A Koliopanos; K Matsuda; Z W Zhu; H Goecke; N Bicheng; A Zimmermann; M Korc; H Friess; M W Büchler
Journal:  Int J Cancer       Date:  2000-10-01       Impact factor: 7.396

6.  Isolation of a pure suspension of rat proximal tubules.

Authors:  P Vinay; A Gougoux; G Lemieux
Journal:  Am J Physiol       Date:  1981-10

7.  Synergistic effect of cell differential agent-II and arsenic trioxide on induction of cell cycle arrest and apoptosis in hepatoma cells.

Authors:  Jian-Wei Liu; Yi Tang; Yan Shen; Xue-Yun Zhong
Journal:  World J Gastroenterol       Date:  2003-01       Impact factor: 5.742

8.  Effects of pentoxifylline on the hepatic content of TGF-beta1 and collagen in Schistosomiasis japonica mice with liver fibrosis.

Authors:  Li-Juan Xiong; Jian-Fang Zhu; Duan-De Luo; Lin-Lan Zen; Shu-Qing Cai
Journal:  World J Gastroenterol       Date:  2003-01       Impact factor: 5.742

9.  Relationship between overexpression of NK-1R, NK-2R and intestinal mucosal damage in acute necrotizing pancreatitis.

Authors:  Xin Shi; Nai-Rong Gao; Qing-Ming Guo; Yong-Jiu Yang; Ming-Dong Huo; Hao-Lin Hu; Helmut Friess
Journal:  World J Gastroenterol       Date:  2003-01       Impact factor: 5.742

10.  Synergetic anticancer effect of combined quercetin and recombinant adenoviral vector expressing human wild-type p53, GM-CSF and B7-1 genes on hepatocellular carcinoma cells in vitro.

Authors:  Ming Shi; Fu-Sheng Wang; Zu-Ze Wu
Journal:  World J Gastroenterol       Date:  2003-01       Impact factor: 5.742

View more
  1 in total

1.  Laser microdissection-based analysis of cytokine balance in the kidneys of patients with lupus nephritis.

Authors:  Y Wang; S Ito; Y Chino; D Goto; I Matsumoto; H Murata; A Tsutsumi; T Hayashi; K Uchida; J Usui; K Yamagata; T Sumida
Journal:  Clin Exp Immunol       Date:  2009-10-06       Impact factor: 4.330

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.