Literature DB >> 12795599

Contribution to stability and folding of a buried polar residue at the CARM1 methylation site of the KIX domain of CBP.

Yu Wei1, Jia-Cherng Horng, Andrew C Vendel, Daniel P Raleigh, Kevin J Lumb.   

Abstract

The transcriptional coactivator and acetyltransferase CREB Binding Protein (CBP) is comprised of several autonomously folded and functionally independent domains. The KIX domain mediates interactions between CBP and numerous transcriptional activators. The folded region of KIX has all the structural features of a globular protein, including three alpha-helices, two short 3(10) helices, and a well-packed hydrophobic core. KIX contains a buried cation-pi interaction between the positively charged guanidinium group of Arg 600 and the aromatic ring of Tyr 640. Arg 600 is a site for regulatory methylation by CARM1/PRMT4, which negates the CREB-binding function of the KIX domain. The role of the Arg 600-Tyr 640 buried polar interaction in specifying and stabilizing the structure of KIX was investigated by comparing the folding of wild-type KIX with the single point mutants Y640F and R600M. The Y640F mutant disrupts a hydrogen bond involving the Tyr 640 OH and the backbone of V595 but still allows for the cation-pi interaction while the R600M mutant disrupts the cation-pi interaction. Both wild type KIX and Y640F exhibit properties expected of native like, globular proteins such as a single oligomerization state (monomer), cooperative thermal and urea-induced unfolding transitions, and a well-packed core. In contrast, the R600M mutant has properties reminiscent of a molten globule state, including a tendency to aggregate, noncooperative thermal unfolding transition, and a loosely packed core. Thus, the buried cation-pi interaction is critical for specifying the unique cooperatively folded structure of KIX.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12795599     DOI: 10.1021/bi0343976

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  14 in total

1.  Profiling the dynamic interfaces of fluorinated transcription complexes for ligand discovery and characterization.

Authors:  William C Pomerantz; Ningkun Wang; Ashley K Lipinski; Rurun Wang; Tomasz Cierpicki; Anna K Mapp
Journal:  ACS Chem Biol       Date:  2012-07-02       Impact factor: 5.100

Review 2.  Host Methyltransferases and Demethylases: Potential New Epigenetic Targets for HIV Cure Strategies and Beyond.

Authors:  Daniela Boehm; Melanie Ott
Journal:  AIDS Res Hum Retroviruses       Date:  2017-11       Impact factor: 2.205

3.  KIX domain of AtMed15a, a Mediator subunit of Arabidopsis, is required for its interaction with different proteins.

Authors:  Vinay Kumar; Mohd Waseem; Nidhi Dwivedi; Sourobh Maji; Angad Kumar; Jitendra K Thakur
Journal:  Plant Signal Behav       Date:  2018-02-08

4.  Arginine residues at internal positions in a protein are always charged.

Authors:  Michael J Harms; Jamie L Schlessman; Gloria R Sue; Bertrand García-Moreno
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-11       Impact factor: 11.205

5.  Identification of small-molecule antagonists that inhibit an activator: coactivator interaction.

Authors:  Jennifer L Best; Carlos A Amezcua; Bernhard Mayr; Lawrence Flechner; Christopher M Murawsky; Beverly Emerson; Tsaffrir Zor; Kevin H Gardner; Marc Montminy
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-07       Impact factor: 11.205

6.  Fragment screening and druggability assessment for the CBP/p300 KIX domain through protein-observed 19F NMR spectroscopy.

Authors:  Clifford T Gee; Edward J Koleski; William C K Pomerantz
Journal:  Angew Chem Int Ed Engl       Date:  2015-02-04       Impact factor: 15.336

7.  Molecular Simulations of Intrinsically Disordered Proteins and Their Binding Mechanisms.

Authors:  Xiakun Chu; Suhani Nagpal; Victor Muñoz
Journal:  Methods Mol Biol       Date:  2022

8.  Automethylation of protein arginine methyltransferase 8 (PRMT8) regulates activity by impeding S-adenosylmethionine sensitivity.

Authors:  Myles B C Dillon; Heather L Rust; Paul R Thompson; Kerri A Mowen
Journal:  J Biol Chem       Date:  2013-08-14       Impact factor: 5.157

Review 9.  Molecular recognition by the KIX domain and its role in gene regulation.

Authors:  Jitendra K Thakur; Archana Yadav; Gitanjali Yadav
Journal:  Nucleic Acids Res       Date:  2013-11-18       Impact factor: 16.971

10.  SPOC: a widely distributed domain associated with cancer, apoptosis and transcription.

Authors:  Luis Sánchez-Pulido; Ana M Rojas; Karel H van Wely; Carlos Martinez-A; Alfonso Valencia
Journal:  BMC Bioinformatics       Date:  2004-07-07       Impact factor: 3.169

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.