Literature DB >> 12782652

Generation of Ski-knockdown mice by expressing a long double-strand RNA from an RNA polymerase II promoter.

Toshie Shinagawa1, Shunsuke Ishii.   

Abstract

We have developed a new vector, named pDECAP, to express long double-strand RNA (ds-RNA) from an RNA polymerase II (Pol II) promoter. Because the transcripts from pDECAP lack both the 5'-cap structure and the 3'-poly(A) tail that facilitate ds-RNA export to the cytoplasm, long ds-RNA from pDECAP does not induce the interferon response. Transgenic mice embryos expressing long ds-RNA for the transcriptional corepressor Ski from this vector exhibited phenotypes that were remarkably similar to those of Ski-deficient embryos, including defects of neural tube closure and eye formation. Thus, this vector provides a new tool to efficiently generate tissue-specific knockdown mice for studying gene function in whole animal systems.

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Year:  2003        PMID: 12782652      PMCID: PMC196066          DOI: 10.1101/gad.1073003

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  36 in total

1.  RNA interference is mediated by 21- and 22-nucleotide RNAs.

Authors:  S M Elbashir; W Lendeckel; T Tuschl
Journal:  Genes Dev       Date:  2001-01-15       Impact factor: 11.361

2.  Specific interference with gene function by double-stranded RNA in early mouse development.

Authors:  F Wianny; M Zernicka-Goetz
Journal:  Nat Cell Biol       Date:  2000-02       Impact factor: 28.824

3.  An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells.

Authors:  S M Hammond; E Bernstein; D Beach; G J Hannon
Journal:  Nature       Date:  2000-03-16       Impact factor: 49.962

4.  RNAi: double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals.

Authors:  P D Zamore; T Tuschl; P A Sharp; D P Bartel
Journal:  Cell       Date:  2000-03-31       Impact factor: 41.582

5.  A species of small antisense RNA in posttranscriptional gene silencing in plants.

Authors:  A J Hamilton; D C Baulcombe
Journal:  Science       Date:  1999-10-29       Impact factor: 47.728

6.  Transcriptional termination and coupled polyadenylation in vitro.

Authors:  M Yonaha; N J Proudfoot
Journal:  EMBO J       Date:  2000-07-17       Impact factor: 11.598

Review 7.  How cells respond to interferons.

Authors:  G R Stark; I M Kerr; B R Williams; R H Silverman; R D Schreiber
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

8.  Role for a bidentate ribonuclease in the initiation step of RNA interference.

Authors:  E Bernstein; A A Caudy; S M Hammond; G J Hannon
Journal:  Nature       Date:  2001-01-18       Impact factor: 49.962

9.  Nonradioactive in situ hybridization to xenopus tissue sections.

Authors:  K Butler; A M Zorn; J B Gurdon
Journal:  Methods       Date:  2001-04       Impact factor: 3.608

10.  Interaction of eukaryotic translation initiation factor 4G with the nuclear cap-binding complex provides a link between nuclear and cytoplasmic functions of the m(7) guanosine cap.

Authors:  L McKendrick; E Thompson; J Ferreira; S J Morley; J D Lewis
Journal:  Mol Cell Biol       Date:  2001-06       Impact factor: 4.272

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  24 in total

Review 1.  RNA interference: biology, mechanism, and applications.

Authors:  Neema Agrawal; P V N Dasaradhi; Asif Mohmmed; Pawan Malhotra; Raj K Bhatnagar; Sunil K Mukherjee
Journal:  Microbiol Mol Biol Rev       Date:  2003-12       Impact factor: 11.056

Review 2.  RNA interference technologies for understanding and treating neurodegenerative diseases.

Authors:  Bingwei Lu
Journal:  Neuromolecular Med       Date:  2004       Impact factor: 3.843

3.  Disclosing hidden transcripts: mouse natural sense-antisense transcripts tend to be poly(A) negative and nuclear localized.

Authors:  Hidenori Kiyosawa; Nathan Mise; Shigeru Iwase; Yoshihide Hayashizaki; Kuniya Abe
Journal:  Genome Res       Date:  2005-03-21       Impact factor: 9.043

4.  Complementary roles of IRS-1 and IRS-2 in the hepatic regulation of metabolism.

Authors:  Cullen M Taniguchi; Kohjiro Ueki; Ronald Kahn
Journal:  J Clin Invest       Date:  2005-03       Impact factor: 14.808

5.  Using siRNA technique to generate transgenic animals with spatiotemporal and conditional gene knockdown.

Authors:  Hung-Shu Chang; Ching-Hui Lin; Yu-Chi Chen; Winston C Y Yu
Journal:  Am J Pathol       Date:  2004-11       Impact factor: 4.307

6.  The cytomegalovirus promoter-driven short hairpin RNA constructs mediate effective RNA interference in zebrafish in vivo.

Authors:  Jianguo Su; Zuoyan Zhu; Yaping Wang; Feng Xiong; Jun Zou
Journal:  Mar Biotechnol (NY)       Date:  2008-01-24       Impact factor: 3.619

7.  The anaphase-promoting complex coordinates initiation of lens differentiation.

Authors:  George Wu; Sara Glickstein; Weijun Liu; Takeo Fujita; Wenqi Li; Qi Yang; Robert Duvoisin; Yong Wan
Journal:  Mol Biol Cell       Date:  2007-01-10       Impact factor: 4.138

8.  Reduced levels of ATF-2 predispose mice to mammary tumors.

Authors:  Toshio Maekawa; Toshie Shinagawa; Yuji Sano; Takahiko Sakuma; Shintaro Nomura; Koichi Nagasaki; Yoshio Miki; Fumiko Saito-Ohara; Johji Inazawa; Takashi Kohno; Jun Yokota; Shunsuke Ishii
Journal:  Mol Cell Biol       Date:  2006-12-22       Impact factor: 4.272

9.  Prnp knockdown in transgenic mice using RNA interference.

Authors:  Micaela Gallozzi; Jérome Chapuis; Fabienne Le Provost; Annick Le Dur; Caroline Morgenthaler; Coralie Peyre; Nathalie Daniel-Carlier; Eric Pailhoux; Marthe Vilotte; Bruno Passet; Laetitia Herzog; Vincent Beringue; José Costa; Philippe Tixador; Gaëlle Tilly; Hubert Laude; Jean-Luc Vilotte
Journal:  Transgenic Res       Date:  2008-03-19       Impact factor: 2.788

10.  rasiRNA pathway controls antisense expression of Drosophila telomeric retrotransposons in the nucleus.

Authors:  Sergey Shpiz; Dmitry Kwon; Yakov Rozovsky; Alla Kalmykova
Journal:  Nucleic Acids Res       Date:  2008-11-26       Impact factor: 16.971

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