Literature DB >> 12782315

Subsite mapping of human salivary alpha-amylase and the mutant Y151M.

Lili Kandra1, Gyöngyi Gyémánt, Judit Remenyik, Chandran Ragunath, Narayanan Ramasubbu.   

Abstract

This study characterizes the substrate-binding sites of human salivary alpha-amylase (HSA) and its Y151M mutant. It describes the first subsite maps, namely, the number of subsites, the position of cleavage sites and apparent subsite energies. The product pattern and cleavage frequencies were determined by high-performance liquid chromatography, utilizing a homologous series of chromophore-substituted maltooligosaccharides of degree of polymerization 3-10 as model substrates. The binding region of HSA is composed of four glycone and three aglycone-binding sites, while that of Tyr151Met is composed of four glycone and two aglycone-binding sites. The subsite maps show that Y151M has strikingly decreased binding energy at subsite (+2), where the mutation has occurred (-2.6 kJ/mol), compared to the binding energy at subsite (+2) of HSA (-12.0 kJ/mol).

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Year:  2003        PMID: 12782315     DOI: 10.1016/s0014-5793(03)00495-2

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  2 in total

1.  Modeling and biochemical analysis of the activity of antibiofilm agent Dispersin B.

Authors:  J E Kerrigan; C Ragunath; Lili Kandra; Gyöngyi Gyémánt; A Lipták; L Jánossy; J B Kaplan; N Ramasubbu
Journal:  Acta Biol Hung       Date:  2008-12

2.  Structure of human salivary alpha-amylase crystallized in a C-centered monoclinic space group.

Authors:  S Zoë Fisher; Lakshmanan Govindasamy; Chingkuang Tu; Mavis Agbandje-McKenna; David N Silverman; Hannu J Rajaniemi; Robert McKenna
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-01-27
  2 in total

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