Literature DB >> 12782135

Atp10a, the mouse ortholog of the human imprinted ATP10A gene, escapes genomic imprinting.

Tomohiko Kayashima1, Kentaro Yamasaki, Keiichiro Joh, Takahiro Yamada, Tohru Ohta, Koh-ichiro Yoshiura, Naomichi Matsumoto, Yoshibumi Nakane, Tsunehiro Mukai, Norio Niikawa, Tatsuya Kishino.   

Abstract

The mouse Atp10a gene is located at the border of an imprinted domain distal to the p-locus on mouse chromosome 7. The localization of Atp10a neighboring the maternally expressed gene Ube3a in the imprinted domain and an unusual inheritance pattern of the obesity phenotype with a p-locus deletion have suggested that Atp10a might be imprinted and associated with body fat. Recently, its human ortholog, ATP10A, was identified as the second imprinted gene with maternal expression in the human chromosome 15q11-q13 imprinted domain. To elucidate the imprinting status of Atp10a, we performed expression analysis in various tissues from reciprocal crosses between C57BL/6 and PWK (divergent strains of Mus musculus) mice. The results revealed that Atp10a was biallelically expressed in all tissues examined. Furthermore, there was no differential methylation in the CpG island and no antisense transcripts of the gene. These findings suggest that the mouse Atp10a gene escapes genomic imprinting.

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Year:  2003        PMID: 12782135     DOI: 10.1016/s0888-7543(03)00077-6

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  9 in total

1.  On the conflicting reports of imprinting status of mouse ATP10a in the adult brain: strain-background-dependent imprinting?

Authors:  Tomohiko Kayashima; Tohru Ohta; Norio Niikawa; Tatsuya Kishino
Journal:  J Hum Genet       Date:  2003-09-04       Impact factor: 3.172

2.  Increased gene dosage of Ube3a results in autism traits and decreased glutamate synaptic transmission in mice.

Authors:  Stephen E P Smith; Yu-Dong Zhou; Guangping Zhang; Zhe Jin; David C Stoppel; Matthew P Anderson
Journal:  Sci Transl Med       Date:  2011-10-05       Impact factor: 17.956

3.  Altered ultrasonic vocalization and impaired learning and memory in Angelman syndrome mouse model with a large maternal deletion from Ube3a to Gabrb3.

Authors:  Yong-Hui Jiang; Yanzhen Pan; Li Zhu; Luis Landa; Jong Yoo; Corinne Spencer; Isabel Lorenzo; Murray Brilliant; Jeffrey Noebels; Arthur L Beaudet
Journal:  PLoS One       Date:  2010-08-20       Impact factor: 3.240

4.  Atp10a, a gene adjacent to the PWS/AS gene cluster, is not imprinted in mouse and is insensitive to the PWS-IC.

Authors:  Amanda J DuBose; Karen A Johnstone; Emily Y Smith; Ryan A E Hallett; James L Resnick
Journal:  Neurogenetics       Date:  2009-11-06       Impact factor: 2.660

5.  Chromosome 15q11-13 duplication syndrome brain reveals epigenetic alterations in gene expression not predicted from copy number.

Authors:  A Hogart; K N Leung; N J Wang; D J Wu; J Driscoll; R O Vallero; N C Schanen; J M LaSalle
Journal:  J Med Genet       Date:  2008-10-07       Impact factor: 6.318

6.  Gender influences monoallelic expression of ATP10A in human brain.

Authors:  Amber Hogart; Katherine A Patzel; Janine M LaSalle
Journal:  Hum Genet       Date:  2008-08-23       Impact factor: 4.132

Review 7.  A survey of tissue-specific genomic imprinting in mammals.

Authors:  Adam R Prickett; Rebecca J Oakey
Journal:  Mol Genet Genomics       Date:  2012-07-21       Impact factor: 3.291

8.  Maternal disruption of Ube3a leads to increased expression of Ube3a-ATS in trans.

Authors:  Miguel Landers; Margaret A Calciano; Dan Colosi; Heather Glatt-Deeley; Joseph Wagstaff; Marc Lalande
Journal:  Nucleic Acids Res       Date:  2005-07-18       Impact factor: 16.971

9.  Smchd1 regulates a subset of autosomal genes subject to monoallelic expression in addition to being critical for X inactivation.

Authors:  Arne W Mould; Zhenyi Pang; Miha Pakusch; Ian D Tonks; Mitchell Stark; Dianne Carrie; Pamela Mukhopadhyay; Annica Seidel; Jonathan J Ellis; Janine Deakin; Matthew J Wakefield; Lutz Krause; Marnie E Blewitt; Graham F Kay
Journal:  Epigenetics Chromatin       Date:  2013-07-02       Impact factor: 4.954

  9 in total

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