Literature DB >> 12782116

Centers of complex networks.

Stefan Wuchty1, Peter F Stadler.   

Abstract

The central vertices in complex networks are of particular interest because they might play the role of organizational hubs. Here, we consider three different geometric centrality measures, excentricity, status, and centroid value, that were originally used in the context of resource placement problems. We show that these quantities lead to useful descriptions of the centers of biological networks which often, but not always, correlate with a purely local notion of centrality such as the vertex degree. We introduce the notion of local centers as local optima of a centrality value "landscape" on a network and discuss briefly their role.

Mesh:

Year:  2003        PMID: 12782116     DOI: 10.1016/s0022-5193(03)00071-7

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  56 in total

1.  Exploration of biological network centralities with CentiBiN.

Authors:  Björn H Junker; Dirk Koschützki; Falk Schreiber
Journal:  BMC Bioinformatics       Date:  2006-04-21       Impact factor: 3.169

Review 2.  Complex networks and simple models in biology.

Authors:  Eric de Silva; Michael P H Stumpf
Journal:  J R Soc Interface       Date:  2005-12-22       Impact factor: 4.118

3.  MORO: a Cytoscape app for relationship analysis between modularity and robustness in large-scale biological networks.

Authors:  Cong-Doan Truong; Tien-Dzung Tran; Yung-Keun Kwon
Journal:  BMC Syst Biol       Date:  2016-12-23

4.  Prediction of lethal and synthetically lethal knock-outs in regulatory networks.

Authors:  Gunnar Boldhaus; Florian Greil; Konstantin Klemm
Journal:  Theory Biosci       Date:  2012-08-24       Impact factor: 1.919

Review 5.  Exploring the multifactorial nature of autism through computational systems biology: calcium and the Rho GTPase RAC1 under the spotlight.

Authors:  Fares Zeidán-Chuliá; José Luiz Rybarczyk-Filho; Alla B Salmina; Ben-Hur Neves de Oliveira; Mami Noda; José Cláudio F Moreira
Journal:  Neuromolecular Med       Date:  2013-03-02       Impact factor: 3.843

6.  Human gene expression sensitivity according to large scale meta-analysis.

Authors:  Pei Hao; Siyuan Zheng; Jie Ping; Kang Tu; Christian Gieger; Rui Wang-Sattler; Yang Zhong; Yixue Li
Journal:  BMC Bioinformatics       Date:  2009-01-30       Impact factor: 3.169

7.  Centrality analysis methods for biological networks and their application to gene regulatory networks.

Authors:  Dirk Koschützki; Falk Schreiber
Journal:  Gene Regul Syst Bio       Date:  2008-05-15

8.  Bayesian statistical modelling of human protein interaction network incorporating protein disorder information.

Authors:  Svetlana Bulashevska; Alla Bulashevska; Roland Eils
Journal:  BMC Bioinformatics       Date:  2010-01-25       Impact factor: 3.169

9.  Analyzing biological network parameters with CentiScaPe.

Authors:  Giovanni Scardoni; Michele Petterlini; Carlo Laudanna
Journal:  Bioinformatics       Date:  2009-09-02       Impact factor: 6.937

10.  Method for Identifying Essential Proteins by Key Features of Proteins in a Novel Protein-Domain Network.

Authors:  Xin He; Linai Kuang; Zhiping Chen; Yihong Tan; Lei Wang
Journal:  Front Genet       Date:  2021-06-29       Impact factor: 4.599

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.