Literature DB >> 12779461

Mathematical model of the cell division cycle of fission yeast.

Bela Novak1, Zsuzsa Pataki, Andrea Ciliberto, John J. Tyson.   

Abstract

Much is known about the genes and proteins controlling the cell cycle of fission yeast. Can these molecular components be spun together into a consistent mechanism that accounts for the observed behavior of growth and division in fission yeast cells? To answer this question, we propose a mechanism for the control system, convert it into a set of 14 differential and algebraic equations, study these equations by numerical simulation and bifurcation theory, and compare our results to the physiology of wild-type and mutant cells. In wild-type cells, progress through the cell cycle (G1-->S-->G2-->M) is related to cyclic progression around a hysteresis loop, driven by cell growth and chromosome alignment on the metaphase plate. However, the control system operates much differently in double-mutant cells, wee1(-) cdc25Delta, which are defective in progress through the latter half of the cell cycle (G2 and M phases). These cells exhibit "quantized" cycles (interdivision times clustering around 90, 160, and 230 min). We show that these quantized cycles are associated with a supercritical Hopf bifurcation in the mechanism, when the wee1 and cdc25 genes are disabled. (c) 2001 American Institute of Physics.

Entities:  

Year:  2001        PMID: 12779461     DOI: 10.1063/1.1345725

Source DB:  PubMed          Journal:  Chaos        ISSN: 1054-1500            Impact factor:   3.642


  42 in total

1.  Integrative analysis of cell cycle control in budding yeast.

Authors:  Katherine C Chen; Laurence Calzone; Attila Csikasz-Nagy; Frederick R Cross; Bela Novak; John J Tyson
Journal:  Mol Biol Cell       Date:  2004-05-28       Impact factor: 4.138

2.  Computational modeling of signaling pathways mediating cell cycle checkpoint control and apoptotic responses to ionizing radiation-induced DNA damage.

Authors:  Yuchao Zhao; In Chio Lou; Rory B Conolly
Journal:  Dose Response       Date:  2011-10-25       Impact factor: 2.658

3.  Process-based network decomposition reveals backbone motif structure.

Authors:  Guanyu Wang; Chenghang Du; Hao Chen; Rahul Simha; Yongwu Rong; Yi Xiao; Chen Zeng
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-24       Impact factor: 11.205

4.  Design of regulation and dynamics in simple biochemical pathways.

Authors:  Ram Rup Sarkar; R Maithreye; Somdatta Sinha
Journal:  J Math Biol       Date:  2010-10-19       Impact factor: 2.259

5.  The regulatory network of cell-cycle progression is fundamentally different in plants versus yeast or metazoans.

Authors:  Nico Dissmeyer; Annika K Weimer; Lieven De Veylder; Bela Novak; Arp Schnittger
Journal:  Plant Signal Behav       Date:  2010-12-01

Review 6.  Economy, speed and size matter: evolutionary forces driving nuclear genome miniaturization and expansion.

Authors:  Thomas Cavalier-Smith
Journal:  Ann Bot       Date:  2005-01       Impact factor: 4.357

7.  Analysis of a generic model of eukaryotic cell-cycle regulation.

Authors:  Attila Csikász-Nagy; Dorjsuren Battogtokh; Katherine C Chen; Béla Novák; John J Tyson
Journal:  Biophys J       Date:  2006-03-31       Impact factor: 4.033

8.  Rapid cycling and precocious termination of G1 phase in cells expressing CDK1AF.

Authors:  Joseph R Pomerening; Jeffrey A Ubersax; James E Ferrell
Journal:  Mol Biol Cell       Date:  2008-05-14       Impact factor: 4.138

9.  Timing robustness in the budding and fission yeast cell cycles.

Authors:  Karan Mangla; David L Dill; Mark A Horowitz
Journal:  PLoS One       Date:  2010-02-01       Impact factor: 3.240

10.  Temporal controls of the asymmetric cell division cycle in Caulobacter crescentus.

Authors:  Shenghua Li; Paul Brazhnik; Bruno Sobral; John J Tyson
Journal:  PLoS Comput Biol       Date:  2009-08-14       Impact factor: 4.475

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