Literature DB >> 12776212

The art and design of genetic screens: Escherichia coli.

Howard A Shuman1, Thomas J Silhavy.   

Abstract

This article summarizes the general principles of selections and screens in Escherichia coli. The focus is on the lac operon, owing to its inherent simplicity and versatility. Examples of different strategies for mutagenesis and mutant discovery are described. In particular, the usefulness and effectiveness of simple colour-based screens are illustrated. The power of lac genetics can be applied to almost any bacterial system with gene fusions that hook any gene of interest to lacZ, which is the structural gene that encodes beta-galactosidase. The diversity of biological processes that can be studied with lac genetics is remarkable and includes DNA metabolism, gene regulation and signal transduction, protein localization and folding, and even electron transport.

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Year:  2003        PMID: 12776212     DOI: 10.1038/nrg1087

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  38 in total

Review 1.  Bugs, drugs and chemical genomics.

Authors:  Terry Roemer; Julian Davies; Guri Giaever; Corey Nislow
Journal:  Nat Chem Biol       Date:  2011-12-15       Impact factor: 15.040

2.  Remembering Malcolm J. Casadaban.

Authors: 
Journal:  J Bacteriol       Date:  2010-05-28       Impact factor: 3.490

3.  Regulation of protein activity with small-molecule-controlled inteins.

Authors:  Georgios Skretas; David W Wood
Journal:  Protein Sci       Date:  2005-01-04       Impact factor: 6.725

4.  Genetic screening for bacterial mutants in liquid growth media by fluorescence-activated cell sorting.

Authors:  Basel H Abuaita; Jeffrey H Withey
Journal:  J Microbiol Methods       Date:  2010-11-19       Impact factor: 2.363

5.  Rapid, Parallel Identification of Catabolism Pathways of Lignin-Derived Aromatic Compounds in Novosphingobium aromaticivorans.

Authors:  Jacob H Cecil; David C Garcia; Richard J Giannone; Joshua K Michener
Journal:  Appl Environ Microbiol       Date:  2018-10-30       Impact factor: 4.792

Review 6.  Quantitative approaches to the study of bistability in the lac operon of Escherichia coli.

Authors:  Moisés Santillán; Michael C Mackey
Journal:  J R Soc Interface       Date:  2008-08-06       Impact factor: 4.118

Review 7.  Tetrahymena as a Unicellular Model Eukaryote: Genetic and Genomic Tools.

Authors:  Marisa D Ruehle; Eduardo Orias; Chad G Pearson
Journal:  Genetics       Date:  2016-06       Impact factor: 4.562

8.  Fine-Tuning of σE Activation Suppresses Multiple Assembly-Defective Mutations in Escherichia coli.

Authors:  Elizabeth M Hart; Aileen O'Connell; Kimberly Tang; Joseph S Wzorek; Marcin Grabowicz; Daniel Kahne; Thomas J Silhavy
Journal:  J Bacteriol       Date:  2019-05-08       Impact factor: 3.490

9.  Transcriptional regulation of fatty acid cis-trans isomerization in the solvent-tolerant soil bacterium, Pseudomonas putida F1.

Authors:  Tatiana Kondakova; John E Cronan
Journal:  Environ Microbiol       Date:  2019-03-12       Impact factor: 5.491

10.  IRIS: a method for reverse engineering of regulatory relations in gene networks.

Authors:  Sandro Morganella; Pietro Zoppoli; Michele Ceccarelli
Journal:  BMC Bioinformatics       Date:  2009-12-23       Impact factor: 3.169

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