Literature DB >> 12773642

The CaTin1 (Capsicum annuum TMV-induced clone 1) and CaTin1-2 genes are linked head-to-head and share a bidirectional promoter.

Ryoung Shin1, Min Jung Kim, Kyung-Hee Paek.   

Abstract

CaTin1 was expressed relatively early in the TMV-inoculated leaves of hot pepper which is resistant to TMV-P(0) infection. Interestingly, there was another homologous gene (CaTin1-2) located in front of CaTin1 in a head-to-head fashion and they shared a single promoter. The expression profile of the CaTin1-2 was very similar to CaTin1 in all the treatments except the slower induction time compared to CaTin1 upon TMV-P(0) inoculation. The promoter analysis of CaTin1 and CaTin1-2 revealed bidirectionality both in cis-elements and activity. The CaTin1-2 promoter had two TATA-boxes, four GCC-boxes, the root responsive element, and a W1-box. The ethylene-inducible promoter activity depended on GCC-boxes and TMV-inducible activity of the CaTin1-2 promoter reached its highest activity when this promoter had a W1-box.

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Year:  2003        PMID: 12773642     DOI: 10.1093/pcp/pcg069

Source DB:  PubMed          Journal:  Plant Cell Physiol        ISSN: 0032-0781            Impact factor:   4.927


  20 in total

1.  The Arabidopsis transcription factor MYB77 modulates auxin signal transduction.

Authors:  Ryoung Shin; Adrien Y Burch; Kari A Huppert; Shiv B Tiwari; Angus S Murphy; Tom J Guilfoyle; Daniel P Schachtman
Journal:  Plant Cell       Date:  2007-08-03       Impact factor: 11.277

2.  Sequence and functional conservation of the intergenic region between the head-to-head genes encoding the small heat shock proteins alphaB-crystallin and HspB2 in the mammalian lineage.

Authors:  Linda Doerwald; Teun van Rheede; Ron P Dirks; Ole Madsen; Remco Rexwinkel; Siebe T van Genesen; Gerard J Martens; Wilfried W de Jong; Nicolette H Lubsen
Journal:  J Mol Evol       Date:  2004-11       Impact factor: 2.395

3.  The Arabidopsis PLAT domain protein1 promotes abiotic stress tolerance and growth in tobacco.

Authors:  Tae Kyung Hyun; Alfonso Albacete; Eric van der Graaff; Seung Hee Eom; Dominik K Großkinsky; Hannah Böhm; Ursula Janschek; Yeonggil Rim; Walid Wahid Ali; Soo Young Kim; Thomas Roitsch
Journal:  Transgenic Res       Date:  2015-03-11       Impact factor: 2.788

4.  A low-temperature-responsive element involved in the regulation of the Arabidopsis thaliana At1g71850/At1g71860 divergent gene pair.

Authors:  Shijuan Liu; Huiqing Chen; Xiulan Li; Wei Zhang
Journal:  Plant Cell Rep       Date:  2016-05-23       Impact factor: 4.570

5.  Analysis of Promoters of Arabidopsis thaliana Divergent Gene Pair SERAT3;2 and IDH-III Shows SERAT3;2 Promoter is Nested Within the IDH-III Promoter.

Authors:  Ritesh Kumar Raipuria; Vajinder Kumar; Kadur Narayan Guruprasad; Shripad Ramachandra Bhat
Journal:  Mol Biotechnol       Date:  2017-07       Impact factor: 2.695

6.  Capsicum annuum tobacco mosaic virus-induced clone 1 expression perturbation alters the plant's response to ethylene and interferes with the redox homeostasis.

Authors:  Ryoung Shin; Jong-Min An; Chang-Jin Park; Young Jin Kim; Sunjoo Joo; Woo Taek Kim; Kyung-Hee Paek
Journal:  Plant Physiol       Date:  2004-04-23       Impact factor: 8.340

7.  The folate precursor para-aminobenzoic acid elicits induced resistance against Cucumber mosaic virus and Xanthomonas axonopodis.

Authors:  Geun Cheol Song; Hye Kyung Choi; Choong-Min Ryu
Journal:  Ann Bot       Date:  2013-03-07       Impact factor: 4.357

8.  The DNA element controlling expression of the varicella-zoster virus open reading frame 28 and 29 genes consists of two divergent unidirectional promoters which have a common USF site.

Authors:  Min Yang; John Hay; William T Ruyechan
Journal:  J Virol       Date:  2004-10       Impact factor: 5.103

9.  Coexpression of neighboring genes in the genome of Arabidopsis thaliana.

Authors:  Elizabeth J B Williams; Dianna J Bowles
Journal:  Genome Res       Date:  2004-06       Impact factor: 9.043

10.  A small intergenic region drives exclusive tissue-specific expression of the adjacent genes in Arabidopsis thaliana.

Authors:  Hernán G Bondino; Estela M Valle
Journal:  BMC Mol Biol       Date:  2009-10-16       Impact factor: 2.946

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