Literature DB >> 12767929

Crystallization and characterization of polyphosphate kinase from Escherichia coli.

Ye Zhu1, Sam S K Lee, Wenqing Xu.   

Abstract

Linear polyphosphate chains have been found to play a key role in bacterial responses to stresses and nutritional depletion, and are necessary for host infection of various pathogens. Polyphosphate kinase (PPK) is a critical enzyme responsible for polyphosphate synthesis in bacteria. PPK knockout mutations in several Gram-negative pathogens identify PPK as an ideal drug target for the development of a new class of antibacterial drugs. To reveal the catalytic mechanism and provide a structural basis for drug discovery, we have purified and crystallized full-length Escherichia coli PPK and its complex with AMP-PNP. The crystals diffract to a resolution of 2.5A and belong to the space group P4(2)2(1)2 with unit-cell parameters a=152.0, b=152.0, and c=150.0 A. Crystal structure of PPK is being determined by the Se-Met MAD experiment.

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Year:  2003        PMID: 12767929     DOI: 10.1016/s0006-291x(03)00886-6

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  8 in total

1.  Mutations in Escherichia coli Polyphosphate Kinase That Lead to Dramatically Increased In Vivo Polyphosphate Levels.

Authors:  Amanda K Rudat; Arya Pokhrel; Todd J Green; Michael J Gray
Journal:  J Bacteriol       Date:  2018-02-23       Impact factor: 3.490

2.  Assaying for Inorganic Polyphosphate in Bacteria.

Authors:  Arya Pokhrel; Jordan C Lingo; Frank Wolschendorf; Michael J Gray
Journal:  J Vis Exp       Date:  2019-01-21       Impact factor: 1.355

3.  Crystal structure of a polyphosphate kinase and its implications for polyphosphate synthesis.

Authors:  Ye Zhu; Weijun Huang; Sam S K Lee; Wenqing Xu
Journal:  EMBO Rep       Date:  2005-07       Impact factor: 8.807

4.  Stringent Response Factors PPX1 and PPK2 Play an Important Role in Mycobacterium tuberculosis Metabolism, Biofilm Formation, and Sensitivity to Isoniazid In Vivo.

Authors:  Yu-Min Chuang; Noton K Dutta; Chien-Fu Hung; T-C Wu; Harvey Rubin; Petros C Karakousis
Journal:  Antimicrob Agents Chemother       Date:  2016-10-21       Impact factor: 5.191

5.  Discovery and antibacterial study of potential PPK1 inhibitors against uropathogenic E. coli.

Authors:  Liang Peng; Liting Zeng; Hongwei Jin; Lixin Yang; Yi Xiao; Ziquan Lan; Zhanpeng Yu; Shi Ouyang; Liangren Zhang; Ning Sun
Journal:  J Enzyme Inhib Med Chem       Date:  2020-12       Impact factor: 5.051

6.  Make or break: the thermodynamic equilibrium of polyphosphate kinase-catalysed reactions.

Authors:  Michael Keppler; Sandra Moser; Henning J Jessen; Christoph Held; Jennifer N Andexer
Journal:  Beilstein J Org Chem       Date:  2022-09-20       Impact factor: 2.544

7.  Antibiotic Treatment Shapes the Antigenic Environment During Chronic TB Infection, Offering Novel Targets for Therapeutic Vaccination.

Authors:  Yu-Min Chuang; Noton K Dutta; James T Gordy; Victoria L Campodónico; Michael L Pinn; Richard B Markham; Chien-Fu Hung; Petros C Karakousis
Journal:  Front Immunol       Date:  2020-04-28       Impact factor: 7.561

8.  A Dual-Specificity Inhibitor Targets Polyphosphate Kinase 1 and 2 Enzymes To Attenuate Virulence of Pseudomonas aeruginosa.

Authors:  Nolan Neville; Nathan Roberge; Xiang Ji; Preyesh Stephen; Jiasheng Louis Lu; Zongchao Jia
Journal:  mBio       Date:  2021-06-15       Impact factor: 7.867

  8 in total

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