Literature DB >> 12765026

Extraction of total RNA from leaves of Eucalyptus and other woody and herbaceous plants using sodium isoascorbate.

Y Suzuki1, T Hibino, T Kawazu, T Wada, T Kihara, H Koyama.   

Abstract

Rapid extraction of total RNA from Eucalyptus leaves is difficult due to the high content of polyphenolics and polysaccharides. A rapid and simple method was developed by using an extraction buffer containing sodium isoascorbate at a concentration of 500 mM. This method consisted of one or two chloroform extractions, one acid guanidium-phenol-chloroform extraction, and isopropanol precipitation alone. The yields of the RNA fractions were 246-1750 micrograms/g fresh weight when leaves of Eucalyptus, five other woody plants, and four herbaceous plants were used as samples. The contamination of the RNA fractions by proteins and polysaccharides was very limited as judged spectrophotometrically. When the RNA fractions were subjected to agarose gel electrophoresis, intact rRNA bands were detected. The RNA fractions could be used for RT-PCR. These results indicate that our new method achieves a simple and rapid preparation of high-quality RNA from leaves of Eucalyptus and other plant species.

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Year:  2003        PMID: 12765026     DOI: 10.2144/03345st05

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  7 in total

1.  Molecular and physiological analysis of Al³⁺ and H⁺ rhizotoxicities at moderately acidic conditions.

Authors:  Yasufumi Kobayashi; Yuriko Kobayashi; Toshihiro Watanabe; Jon E Shaff; Hiroyuki Ohta; Leon V Kochian; Tadao Wagatsuma; Thomas B Kinraide; Hiroyuki Koyama
Journal:  Plant Physiol       Date:  2013-07-09       Impact factor: 8.340

2.  Characterization of the complex regulation of AtALMT1 expression in response to phytohormones and other inducers.

Authors:  Yasufumi Kobayashi; Yuriko Kobayashi; Miki Sugimoto; Venkatachalam Lakshmanan; Satoshi Iuchi; Masatomo Kobayashi; Harsh P Bais; Hiroyuki Koyama
Journal:  Plant Physiol       Date:  2013-04-26       Impact factor: 8.340

3.  Characterization of AtALMT1 expression in aluminum-inducible malate release and its role for rhizotoxic stress tolerance in Arabidopsis.

Authors:  Yuriko Kobayashi; Owen A Hoekenga; Hirotaka Itoh; Midori Nakashima; Shoichiro Saito; Jon E Shaff; Lyza G Maron; Miguel A Piñeros; Leon V Kochian; Hiroyuki Koyama
Journal:  Plant Physiol       Date:  2007-09-20       Impact factor: 8.340

4.  Biochemical and genomic characterization of terpene synthases in Magnolia grandiflora.

Authors:  Sungbeom Lee; Joseph Chappell
Journal:  Plant Physiol       Date:  2008-05-08       Impact factor: 8.340

5.  Zinc finger protein STOP1 is critical for proton tolerance in Arabidopsis and coregulates a key gene in aluminum tolerance.

Authors:  Satoshi Iuchi; Hiroyuki Koyama; Atsuko Iuchi; Yasufumi Kobayashi; Sadako Kitabayashi; Yuriko Kobayashi; Takashi Ikka; Takashi Hirayama; Kazuo Shinozaki; Masatomo Kobayashi
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-29       Impact factor: 11.205

6.  Overexpression of AtALMT1 in the Arabidopsis thaliana ecotype Columbia results in enhanced Al-activated malate excretion and beneficial bacterium recruitment.

Authors:  Yasufumi Kobayashi; Venkatachalam Lakshmanan; Yuriko Kobayashi; Minatsu Asai; Satoshi Iuchi; Masatomo Kobayashi; Harsh P Bais; Hiroyuki Koyama
Journal:  Plant Signal Behav       Date:  2013-07-01

7.  Differences in gene expression within a striking phenotypic mosaic Eucalyptus tree that varies in susceptibility to herbivory.

Authors:  Amanda Padovan; Robert Lanfear; Andras Keszei; William J Foley; Carsten Külheim
Journal:  BMC Plant Biol       Date:  2013-02-20       Impact factor: 4.215

  7 in total

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