Literature DB >> 12755815

The second generation of the International Equine Gene Mapping Workshop half-sibling linkage map.

G Guérin1, E Bailey, D Bernoco, I Anderson, D F Antczak, K Bell, I Biros, G Bjørnstad, A T Bowling, R Brandon, A R Caetano, G Cholewinski, D Colling, M Eggleston, N Ellis, J Flynn, B Gralak, T Hasegawa, M Ketchum, G Lindgren, L A Lyons, L V Millon, D Mariat, J Murray, A Neau, K Røed, K Sandberg, L C Skow, I Tammen, T Tozaki, E Van Dyk, B Weiss, A Young, J Ziegle.   

Abstract

A low-density, male-based linkage map was constructed as one of the objectives of the International Equine Gene Mapping Workshop. Here we report the second generation map based on testing 503 half-sibling offspring from 13 sire families for 344 informative markers using the CRIMAP program. The multipoint linkage analysis localized 310 markers (90%) with 257 markers being linearly ordered. The map included 34 linkage groups representing all 31 autosomes and spanning 2262 cM with an average interval between loci of 10.1 cM. This map is a milestone in that it is the first map with linkage groups assigned to each of the 31 automosomes and a single linkage group to all but three chromosomes.

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Year:  2003        PMID: 12755815     DOI: 10.1046/j.1365-2052.2003.00973.x

Source DB:  PubMed          Journal:  Anim Genet        ISSN: 0268-9146            Impact factor:   3.169


  9 in total

1.  MHC haplotype diversity in Persian Arabian horses determined using polymorphic microsatellites.

Authors:  R Sadeghi; Mohammad Moradi-Shahrbabak; S R Miraei Ashtiani; D C Miller; Douglas F Antczak
Journal:  Immunogenetics       Date:  2017-11-23       Impact factor: 2.846

2.  The first-generation whole-genome radiation hybrid map in the horse identifies conserved segments in human and mouse genomes.

Authors:  Bhanu P Chowdhary; Terje Raudsepp; Srinivas R Kata; Glenda Goh; Lee V Millon; Veronica Allan; François Piumi; Gérard Guérin; June Swinburne; Matthew Binns; Teri L Lear; Jim Mickelson; James Murray; Douglas F Antczak; James E Womack; Loren C Skow
Journal:  Genome Res       Date:  2003-04       Impact factor: 9.043

3.  A high-resolution physical map of equine homologs of HSA19 shows divergent evolution compared with other mammals.

Authors:  Candice Brinkmeyer-Langford; Terje Raudsepp; Eun-Joon Lee; Glenda Goh; Alejandro A Schäffer; Richa Agarwala; Michelle L Wagner; Teruaki Tozaki; Loren C Skow; James E Womack; James R Mickelson; Bhanu P Chowdhary
Journal:  Mamm Genome       Date:  2005-09-14       Impact factor: 2.957

Review 4.  Applied equine genetics.

Authors:  C J Finno; D L Bannasch
Journal:  Equine Vet J       Date:  2014-06-25       Impact factor: 2.888

5.  Multidirectional cross-species painting illuminates the history of karyotypic evolution in Perissodactyla.

Authors:  Vladimir A Trifonov; Roscoe Stanyon; Anastasia I Nesterenko; Beiyuan Fu; Polina L Perelman; Patricia C M O'Brien; Gary Stone; Nadezhda V Rubtsova; Marlys L Houck; Terence J Robinson; Malcolm A Ferguson-Smith; Gauthier Dobigny; Alexander S Graphodatsky; Fengtang Yang
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

6.  First-generation linkage map of the gray, short-tailed opossum, Monodelphis domestica, reveals genome-wide reduction in female recombination rates.

Authors:  Paul B Samollow; Candace M Kammerer; Susan M Mahaney; Jennifer L Schneider; Scott J Westenberger; John L VandeBerg; Edward S Robinson
Journal:  Genetics       Date:  2004-01       Impact factor: 4.562

7.  Exceptional conservation of horse-human gene order on X chromosome revealed by high-resolution radiation hybrid mapping.

Authors:  Terje Raudsepp; Eun-Joon Lee; Srinivas R Kata; Candice Brinkmeyer; James R Mickelson; Loren C Skow; James E Womack; Bhanu P Chowdhary
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-24       Impact factor: 11.205

8.  "Adopt-a-Tissue" Initiative Advances Efforts to Identify Tissue-Specific Histone Marks in the Mare.

Authors:  N B Kingsley; Natasha A Hamilton; Gabriella Lindgren; Ludovic Orlando; Ernie Bailey; Samantha Brooks; Molly McCue; T S Kalbfleisch; James N MacLeod; Jessica L Petersen; Carrie J Finno; Rebecca R Bellone
Journal:  Front Genet       Date:  2021-03-26       Impact factor: 4.599

9.  A second generation genetic map for rainbow trout (Oncorhynchus mykiss).

Authors:  Caird E Rexroad; Yniv Palti; Scott A Gahr; Roger L Vallejo
Journal:  BMC Genet       Date:  2008-11-19       Impact factor: 2.797

  9 in total

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