Literature DB >> 12755601

Investigating the role of the latch in the positive supercoiling mechanism of reverse gyrase.

A Chapin Rodríguez1.   

Abstract

Reverse gyrase is the only topoisomerase known to positively supercoil DNA and the only protein unique to hyperthermophiles. The enzyme comprises an N-terminal ATPase domain and a C-terminal topoisomerase I domain, which interact to couple the hydrolysis of ATP to the overwinding of DNA. The part of the ATPase domain termed the "latch" represses topoisomerase activity in the absence of nucleotide. Here I provide evidence that the latch, in addition to its regulatory role, participates in the supercoiling mechanism during the DNA cleavage and religation steps. The latch also contributes to the coordination of ATP hydrolysis and positive supercoiling by inhibiting ATPase activity in the absence of supercoiling. The latch therefore plays an important role in the communication between the two domains of reverse gyrase.

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Year:  2003        PMID: 12755601     DOI: 10.1021/bi034188l

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  11 in total

1.  The reverse gyrase from Pyrobaculum calidifontis, a novel extremely thermophilic DNA topoisomerase endowed with DNA unwinding and annealing activities.

Authors:  Anmbreen Jamroze; Giuseppe Perugino; Anna Valenti; Naeem Rashid; Mosè Rossi; Muhammad Akhtar; Maria Ciaramella
Journal:  J Biol Chem       Date:  2013-12-17       Impact factor: 5.157

2.  Functional evaluation of four putative DNA-binding regions in Thermoanaerobacter tengcongensis reverse gyrase.

Authors:  Jie Li; Jingfang Liu; Jian Zhou; Hua Xiang
Journal:  Extremophiles       Date:  2011-02-12       Impact factor: 2.395

3.  Direct observation of DNA overwinding by reverse gyrase.

Authors:  Taisaku Ogawa; Katsunori Yogo; Shou Furuike; Kazuo Sutoh; Akihiko Kikuchi; Kazuhiko Kinosita
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-28       Impact factor: 11.205

Review 4.  Genome stability: recent insights in the topoisomerase reverse gyrase and thermophilic DNA alkyltransferase.

Authors:  Antonella Vettone; Giuseppe Perugino; Mosè Rossi; Anna Valenti; Maria Ciaramella
Journal:  Extremophiles       Date:  2014-08-08       Impact factor: 2.395

5.  The latch modulates nucleotide and DNA binding to the helicase-like domain of Thermotoga maritima reverse gyrase and is required for positive DNA supercoiling.

Authors:  Agneyo Ganguly; Yoandris Del Toro Duany; Markus G Rudolph; Dagmar Klostermeier
Journal:  Nucleic Acids Res       Date:  2010-11-04       Impact factor: 16.971

6.  The reverse gyrase helicase-like domain is a nucleotide-dependent switch that is attenuated by the topoisomerase domain.

Authors:  Yoandris del Toro Duany; Stefan P Jungblut; Andreas S Schmidt; Dagmar Klostermeier
Journal:  Nucleic Acids Res       Date:  2008-09-16       Impact factor: 16.971

7.  Functional interaction of reverse gyrase with single-strand binding protein of the archaeon Sulfolobus.

Authors:  Alessandra Napoli; Anna Valenti; Vincenzo Salerno; Marc Nadal; Florence Garnier; Mosè Rossi; Maria Ciaramella
Journal:  Nucleic Acids Res       Date:  2005-01-26       Impact factor: 16.971

8.  Crystal structures of Thermotoga maritima reverse gyrase: inferences for the mechanism of positive DNA supercoiling.

Authors:  Markus G Rudolph; Yoandris del Toro Duany; Stefan P Jungblut; Agneyo Ganguly; Dagmar Klostermeier
Journal:  Nucleic Acids Res       Date:  2012-12-02       Impact factor: 16.971

9.  Dissection of reverse gyrase activities: insight into the evolution of a thermostable molecular machine.

Authors:  Anna Valenti; Giuseppe Perugino; Anna D'Amaro; Andrea Cacace; Alessandra Napoli; Mosè Rossi; Maria Ciaramella
Journal:  Nucleic Acids Res       Date:  2008-07-09       Impact factor: 16.971

Review 10.  Reverse gyrase--recent advances and current mechanistic understanding of positive DNA supercoiling.

Authors:  Pavel Lulchev; Dagmar Klostermeier
Journal:  Nucleic Acids Res       Date:  2014-07-10       Impact factor: 16.971

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