Literature DB >> 12744600

Synthesis of antisense oligonucleotides with minimum depurination.

Achim H Krotz1, Douglas L Cole, Vasulinga T Ravikumar.   

Abstract

The removal of 4,4'-dimethoxytrityl (DMTr) groups from oligonucleotides at low pH and the acid lability of the glycosidic linkage of purine nucleotides constitute an inherent conflict in preparative oligonucleotide chemistry. The use of a mildly acidic NaOAc buffer (10 mM, pH 3.0-3.2) allows adjustment of the pH in a range where the progress of the DMTr removal reaction can be monitored conveniently by HPLC and the optimum reaction time can be calculated. As a result, oligonucleotides with minimum depurination are obtained.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12744600     DOI: 10.1081/NCN-120019499

Source DB:  PubMed          Journal:  Nucleosides Nucleotides Nucleic Acids        ISSN: 1525-7770            Impact factor:   1.381


  3 in total

1.  Mild detritylation of nucleic acid hydroxyl groups by warming up.

Authors:  Jozef Salon; Bo Zhang; Zhen Huang
Journal:  Nucleosides Nucleotides Nucleic Acids       Date:  2011-04       Impact factor: 1.381

2.  RecJ 5' Exonuclease Digestion of Oligonucleotide Failure Strands: A "Green" Method of Trityl-On Purification.

Authors:  Michael Jensen; Ronald Davis
Journal:  Biochemistry       Date:  2017-05-01       Impact factor: 3.162

3.  Synthesis of high-quality libraries of long (150mer) oligonucleotides by a novel depurination controlled process.

Authors:  Emily M LeProust; Bill J Peck; Konstantin Spirin; Heather Brummel McCuen; Bridget Moore; Eugeni Namsaraev; Marvin H Caruthers
Journal:  Nucleic Acids Res       Date:  2010-03-22       Impact factor: 16.971

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.