Literature DB >> 12743020

Genome function and nuclear architecture: from gene expression to nanoscience.

Timothy P O'Brien1, Carol J Bult, Christoph Cremer, Michael Grunze, Barbara B Knowles, Jorg Langowski, James McNally, Thoru Pederson, Joan C Politz, Ana Pombo, Gunter Schmahl, Joachim P Spatz, Roel van Driel.   

Abstract

Biophysical, chemical, and nanoscience approaches to the study of nuclear structure and activity have been developing recently and hold considerable promise. A selection of fundamental problems in genome organization and function are reviewed and discussed in the context of these new perspectives and approaches. Advancing these concepts will require coordinated networks of physicists, chemists, and materials scientists collaborating with cell, developmental, and genome biologists.

Mesh:

Year:  2003        PMID: 12743020     DOI: 10.1101/gr.946403

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  18 in total

1.  Radial arrangement of chromosome territories in human cell nuclei: a computer model approach based on gene density indicates a probabilistic global positioning code.

Authors:  G Kreth; J Finsterle; J von Hase; M Cremer; C Cremer
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

Review 2.  The nucleus introduced.

Authors:  Thoru Pederson
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-05-01       Impact factor: 10.005

3.  Combining FISH with localisation microscopy: Super-resolution imaging of nuclear genome nanostructures.

Authors:  Yanina Weiland; Paul Lemmer; Christoph Cremer
Journal:  Chromosome Res       Date:  2011-01       Impact factor: 5.239

4.  Fractal Characterization of Chromatin Decompaction in Live Cells.

Authors:  Ji Yi; Yolanda Stypula-Cyrus; Catherine S Blaha; Hemant K Roy; Vadim Backman
Journal:  Biophys J       Date:  2015-12-01       Impact factor: 4.033

5.  Nanostructure of specific chromatin regions and nuclear complexes.

Authors:  H Mathée; D Baddeley; C Wotzlaw; J Fandrey; C Cremer; U Birk
Journal:  Histochem Cell Biol       Date:  2005-11-12       Impact factor: 4.304

Review 6.  Organization of interphase chromatin.

Authors:  Rachel A Horowitz-Scherer; Christopher L Woodcock
Journal:  Chromosoma       Date:  2005-12-17       Impact factor: 4.316

7.  Systems biology meets chromatin function: a report on the Fourth Elmau Conference on Nuclear Organization.

Authors:  Christophe Lavelle; Alex Sigal
Journal:  Chromosome Res       Date:  2007-01-26       Impact factor: 5.239

8.  Chromosome conformation by crosslinking: polymer physics matters.

Authors:  Jörg Langowski
Journal:  Nucleus       Date:  2010 Jan-Feb       Impact factor: 4.197

9.  Targeting of Heat Shock Protein HSPA6 (HSP70B') to the Periphery of Nuclear Speckles is Disrupted by a Transcription Inhibitor Following Thermal Stress in Human Neuronal Cells.

Authors:  Larissa Becirovic; Ian R Brown
Journal:  Neurochem Res       Date:  2016-10-14       Impact factor: 3.996

10.  Generic features of tertiary chromatin structure as detected in natural chromosomes.

Authors:  Waltraud G Müller; Dietmar Rieder; Gregor Kreth; Christoph Cremer; Zlatko Trajanoski; James G McNally
Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

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