Literature DB >> 12733872

Environment-independent 14-helix formation in short beta-peptides: striking a balance between shape control and functional diversity.

Tami L Raguse1, Jonathan R Lai, Samuel H Gellman.   

Abstract

We report a significant and unanticipated advance in the study of beta-amino acid-based foldamers: a small proportion of highly preorganized residues can impart high stability to a specific helical secondary structure in water. Most of the residues in these beta-peptides (2 and 3) are intrinsically flexible. Flexible beta-amino acids can be readily and enantiospecifically prepared in functionally diverse forms, but preorganized residues with side chains are rare and challenging to synthesize. Our findings demonstrate that interspersing a few copies of an unfunctionalized but rigid residue among a larger number of flexible residues with diverse side chains is a viable strategy for creating beta-peptides that adopt the 14-helix conformation and therefore display side chains in a predictable spatial arrangement. These results are significant because they enhance the prospects of developing beta-peptides with useful activities.

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Year:  2003        PMID: 12733872     DOI: 10.1021/ja0341485

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  17 in total

1.  beta-Peptides as inhibitors of protein-protein interactions.

Authors:  Joshua A Kritzer; Olen M Stephens; Danielle A Guarracino; Samuel K Reznik; Alanna Schepartz
Journal:  Bioorg Med Chem       Date:  2005-01-03       Impact factor: 3.641

2.  Association of helical beta-peptides and their aggregation behavior from the potential of mean force in explicit solvent.

Authors:  Clark A Miller; Samuel H Gellman; Nicholas L Abbott; Juan J de Pablo
Journal:  Biophys J       Date:  2009-06-03       Impact factor: 4.033

3.  Beta-peptides with improved affinity for hDM2 and hDMX.

Authors:  Elizabeth A Harker; Douglas S Daniels; Danielle A Guarracino; Alanna Schepartz
Journal:  Bioorg Med Chem       Date:  2009-01-23       Impact factor: 3.641

4.  Mechanical stability of helical beta-peptides and a comparison of explicit and implicit solvent models.

Authors:  Clark A Miller; Samuel H Gellman; Nicholas L Abbott; Juan J de Pablo
Journal:  Biophys J       Date:  2008-07-11       Impact factor: 4.033

5.  Inhibition of herpes simplex virus type 1 infection by cationic beta-peptides.

Authors:  Radeekorn Akkarawongsa; Terra B Potocky; Emily P English; Samuel H Gellman; Curtis R Brandt
Journal:  Antimicrob Agents Chemother       Date:  2008-04-07       Impact factor: 5.191

6.  Inhibiting HIV fusion with a beta-peptide foldamer.

Authors:  Olen M Stephens; Sunghwan Kim; Brett D Welch; Michael E Hodsdon; Michael S Kay; Alanna Schepartz
Journal:  J Am Chem Soc       Date:  2005-09-28       Impact factor: 15.419

7.  Rotamer Libraries for the High-Resolution Design of β-Amino Acid Foldamers.

Authors:  Andrew M Watkins; Timothy W Craven; P Douglas Renfrew; Paramjit S Arora; Richard Bonneau
Journal:  Structure       Date:  2017-10-12       Impact factor: 5.006

8.  Thermodynamic stability of beta-peptide helices and the role of cyclic residues.

Authors:  Nitin Rathore; Samuel H Gellman; Juan J de Pablo
Journal:  Biophys J       Date:  2006-08-11       Impact factor: 4.033

9.  Differential impact of β and γ residue preorganization on α/β/γ-peptide helix stability in water.

Authors:  Young-Hee Shin; David E Mortenson; Kenneth A Satyshur; Katrina T Forest; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2013-05-23       Impact factor: 15.419

10.  A rationally designed aldolase foldamer.

Authors:  Manuel M Müller; Matthew A Windsor; William C Pomerantz; Samuel H Gellman; Donald Hilvert
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

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