Literature DB >> 12724307

IPPRED: server for proteins interactions inference.

Nicolas Goffard1, Virginie Garcia, Florian Iragne, Alexis Groppi, Antoine de Daruvar.   

Abstract

SUMMARY: IPPRED is a web based server to infer protein-protein interactions through homology search between candidate proteins and those described as interacting. This simple inference allows to propose or to validate potential interactions. AVAILABILITY: IPPRED is freely available at http://cbi.labri.fr/outils/ippred/.

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Year:  2003        PMID： 12724307     DOI： 10.1093/bioinformatics/btg091

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  6 in total

1.  Computational approaches to protein-protein interaction.

Authors:  Giacomo Franzot; Oliviero Carugo
Journal:  J Struct Funct Genomics       Date:  2003

2.  PreSPI: a domain combination based prediction system for protein-protein interaction.

Authors:  Dong-Soo Han; Hong-Soog Kim; Woo-Hyuk Jang; Sung-Doke Lee; Jung-Keun Suh
Journal:  Nucleic Acids Res       Date:  2004-12-01       Impact factor: 16.971

3.  Building and analyzing protein interactome networks by cross-species comparisons.

Authors:  Amy M Wiles; Mark Doderer; Jianhua Ruan; Ting-Ting Gu; Dashnamoorthy Ravi; Barron Blackman; Alexander J R Bishop
Journal:  BMC Syst Biol       Date:  2010-03-30

4.  Cluster analysis of networks generated through homology: automatic identification of important protein communities involved in cancer metastasis.

Authors:  Pall F Jonsson; Tamara Cavanna; Daniel Zicha; Paul A Bates
Journal:  BMC Bioinformatics       Date:  2006-01-06       Impact factor: 3.169

5.  Reconstruction of human protein interolog network using evolutionary conserved network.

Authors:  Tao-Wei Huang; Chung-Yen Lin; Cheng-Yan Kao
Journal:  BMC Bioinformatics       Date:  2007-05-10       Impact factor: 3.169

6.  Ortholog-based protein-protein interaction prediction and its application to inter-species interactions.

Authors:  Sheng-An Lee; Cheng-hsiung Chan; Chi-Hung Tsai; Jin-Mei Lai; Feng-Sheng Wang; Cheng-Yan Kao; Chi-Ying F Huang
Journal:  BMC Bioinformatics       Date:  2008-12-12       Impact factor: 3.169
  6 in total

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