Literature DB >> 12724302

MARAN: normalizing micro-array data.

Kristof Engelen1, Bert Coessens, Kathleen Marchal, Bart De Moor.   

Abstract

SUMMARY: MARAN is a web-based application for normalizing microarray data. MARAN comprises a generic ANOVA model, an option for Loess fitting prior to ANOVA analysis, and a module for selecting genes with significantly changing expression. AVAILABILITY: http://www.esat.kuleuven.ac.be/maran/.

Mesh：

Year:  2003        PMID： 12724302     DOI： 10.1093/bioinformatics/btg085

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  6 in total

1.  INCLUSive: A web portal and service registry for microarray and regulatory sequence analysis.

Authors:  Bert Coessens; Gert Thijs; Stein Aerts; Kathleen Marchal; Frank De Smet; Kristof Engelen; Patrick Glenisson; Yves Moreau; Janick Mathys; Bart De Moor
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

Review 2.  Computational approaches to identify promoters and cis-regulatory elements in plant genomes.

Authors:  Stephane Rombauts; Kobe Florquin; Magali Lescot; Kathleen Marchal; Pierre Rouzé; Yves van de Peer
Journal:  Plant Physiol       Date:  2003-07       Impact factor: 8.340

3.  Microarray analysis and motif detection reveal new targets of the Salmonella enterica serovar Typhimurium HilA regulatory protein, including hilA itself.

Authors:  Sigrid C J De Keersmaecker; Kathleen Marchal; Tine L A Verhoeven; Kristof Engelen; Jos Vanderleyden; Corrella S Detweiler
Journal:  J Bacteriol       Date:  2005-07       Impact factor: 3.490

4.  A mitogen-activated protein kinase pathway essential for mating and contributing to vegetative growth in Neurospora crassa.

Authors:  Dan Li; Piotr Bobrowicz; Heather H Wilkinson; Daniel J Ebbole
Journal:  Genetics       Date:  2005-03-31       Impact factor: 4.562

5.  Optimized LOWESS normalization parameter selection for DNA microarray data.

Authors:  John A Berger; Sampsa Hautaniemi; Anna-Kaarina Järvinen; Henrik Edgren; Sanjit K Mitra; Jaakko Astola
Journal:  BMC Bioinformatics       Date:  2004-12-09       Impact factor: 3.169

6.  RNA-seq and microarray complement each other in transcriptome profiling.

Authors:  Sunitha Kogenaru; Yan Qing; Yinping Guo; Nian Wang
Journal:  BMC Genomics       Date:  2012-11-15       Impact factor: 3.969
  6 in total

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