Literature DB >> 12721792

Virioplankton community structure along a salinity gradient in a solar saltern.

Ruth-Anne Sandaa1, Evy Foss Skjoldal, Gunnar Bratbak.   

Abstract

The virioplankton community structure along a salinity gradient from near seawater (40 per thousand ) to saturated sodium chloride brine (370 per thousand ) in a solar saltern was investigated by pulsed-field gel electrophoresis. Viral populations with genome sizes varying from 10 kb to 533 kb were detected. The viral community structure changed along the salinity gradient. Cluster analysis of the viral genome-banding pattern resulted in two main clusters. The virioplankton diversity within the samples with salinity from 40 per thousand to 150 per thousand was on the same cluster of a cladogram. The other group consisted of virioplankton from samples with salinity above 220 per thousand. The virioplankton diversity in the different samples was calculated using the Shannon index. The diversity index demonstrated an increase in diversity in the samples along the gradient from 40 per thousand to 150 per thousand salinity, followed by a decrease in the diversity index along the rest of the salinity gradient. These results demonstrate how viral diversity changes from habitats that are considered one of the most common (seawater) to habitats that are extreme in salt concentrations (saturated sodium brine). The diversity index was highest in the environments that lie in between the most extreme and the most common.

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Year:  2003        PMID: 12721792     DOI: 10.1007/s00792-003-0328-5

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  12 in total

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4.  Molecular ecology of extremely halophilic Archaea and Bacteria.

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5.  Population dynamics of chesapeake bay virioplankton: total-community analysis by pulsed-field gel electrophoresis

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Journal:  Appl Environ Microbiol       Date:  1999-01       Impact factor: 4.792

6.  Extremely halophilic bacteria in crystallizer ponds from solar salterns.

Authors:  J Antón; R Rosselló-Mora; F Rodríguez-Valera; R Amann
Journal:  Appl Environ Microbiol       Date:  2000-07       Impact factor: 4.792

7.  The contribution of halophilic Bacteria to the red coloration of saltern crystallizer ponds(1).

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10.  Characteristics of the heterotrophic bacterial populations in hypersaline environments of different salt concentrations.

Authors:  F Rodriguez-Valera; F Ruiz-Berraquero; A Ramos-Cormenzana
Journal:  Microb Ecol       Date:  1981-09       Impact factor: 4.552

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  12 in total

1.  Dynamic viral populations in hypersaline systems as revealed by metagenomic assembly.

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Journal:  Appl Environ Microbiol       Date:  2012-07-06       Impact factor: 4.792

2.  Abundance, diversity, and dynamics of viruses on microorganisms in activated sludge processes.

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Authors:  Joanne B Emerson; Brian C Thomas; Karen Andrade; Karla B Heidelberg; Jillian F Banfield
Journal:  Appl Environ Microbiol       Date:  2013-08-30       Impact factor: 4.792

4.  Metatranscriptomic analysis of extremely halophilic viral communities.

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5.  Viral distribution and life strategies in the Bach Dang Estuary, Vietnam.

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6.  Virioplankton community structure in Tunisian solar salterns.

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Review 7.  Culture-independent approaches for studying viruses from hypersaline environments.

Authors:  Fernando Santos; Pablo Yarza; Víctor Parro; Inmaculada Meseguer; Ramon Rosselló-Móra; Josefa Antón
Journal:  Appl Environ Microbiol       Date:  2012-01-13       Impact factor: 4.792

8.  A novel Halomonas ventosae-specific virulent halovirus isolated from the Qiaohou salt mine in Yunnan, Southwest China.

Authors:  Chao-Qun Fu; Qin Zhao; Zhi-Ying Li; Yong-Xia Wang; Shi-Ying Zhang; Yong-Hong Lai; Wei Xiao; Xiao-Long Cui
Journal:  Extremophiles       Date:  2015-12-01       Impact factor: 2.395

9.  Reconstructing viral genomes from the environment using fosmid clones: the case of haloviruses.

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10.  Do patterns of bacterial diversity along salinity gradients differ from those observed for macroorganisms?

Authors:  Jianjun Wang; Dongmei Yang; Yong Zhang; Ji Shen; Christopher van der Gast; Martin W Hahn; Qinglong Wu
Journal:  PLoS One       Date:  2011-11-18       Impact factor: 3.240

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