Literature DB >> 12719525

Identification of genes involved in cell invasion by using a library of randomized hybrid ribozymes.

Eigo Suyama1, Hiroaki Kawasaki, Motowo Nakajima, Kazunari Taira.   

Abstract

Libraries of RNA helicase-coupled randomized ribozymes are a powerful tool for the identification of functional genes. We have demonstrated the usefulness of this functional gene-discovery system by identifying genes involved in tumor invasion, a process that is an essential feature of tumor metastasis: the spread of cancer cells from the original tumor to other sites in the body that imposes serious problems in the prognosis and treatment of cancer. Using a filter-based invasion assay in vitro, we isolated ribozymes that enhanced the invasive properties of NIH 3T3 fibroblasts. Sequence analysis of selected clones and a database search revealed that genes such as the gene for Gem GTPase and uncharacterized genes that resemble genes for myosin phosphatase and protein-tyrosine-phosphatase are involved in cell invasion. Our system for gene identification by using ribozymes and the functional analysis of target genes should help to clarify the complex mechanisms of invasion and metastasis and might provide information that is relevant to cancer therapy.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12719525      PMCID: PMC156250          DOI: 10.1073/pnas.1035850100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  29 in total

1.  Plat-E: an efficient and stable system for transient packaging of retroviruses.

Authors:  S Morita; T Kojima; T Kitamura
Journal:  Gene Ther       Date:  2000-06       Impact factor: 5.250

2.  U6 promoter-driven siRNAs with four uridine 3' overhangs efficiently suppress targeted gene expression in mammalian cells.

Authors:  Makoto Miyagishi; Kazunari Taira
Journal:  Nat Biotechnol       Date:  2002-05       Impact factor: 54.908

3.  Identification of genes by hybrid ribozymes that couple cleavage activity with the unwinding activity of an endogenous RNA helicase.

Authors:  Hiroaki Kawasaki; Kazunari Taira
Journal:  EMBO Rep       Date:  2002-04-18       Impact factor: 8.807

4.  Search for genes that suppress cancer metastasis.

Authors:  I J Fidler; R Radinsky
Journal:  J Natl Cancer Inst       Date:  1996-12-04       Impact factor: 13.506

5.  Identification of eIF2Bgamma and eIF2gamma as cofactors of hepatitis C virus internal ribosome entry site-mediated translation using a functional genomics approach.

Authors:  M Kruger; C Beger; Q X Li; P J Welch; R Tritz; M Leavitt; J R Barber; F Wong-Staal
Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-18       Impact factor: 11.205

6.  Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells.

Authors:  S M Elbashir; J Harborth; W Lendeckel; A Yalcin; K Weber; T Tuschl
Journal:  Nature       Date:  2001-05-24       Impact factor: 49.962

7.  Transforming growth factor beta stimulates mammary adenocarcinoma cell invasion and metastatic potential.

Authors:  D R Welch; A Fabra; M Nakajima
Journal:  Proc Natl Acad Sci U S A       Date:  1990-10       Impact factor: 11.205

8.  Identification of Id4 as a regulator of BRCA1 expression by using a ribozyme-library-based inverse genomics approach.

Authors:  C Beger; L N Pierce; M Kruger; E G Marcusson; J M Robbins; P Welcsh; P J Welch; K Welte; M C King; J R Barber; F Wong-Staal
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-02       Impact factor: 11.205

9.  Genomic analysis of metastasis reveals an essential role for RhoC.

Authors:  E A Clark; T R Golub; E S Lander; R O Hynes
Journal:  Nature       Date:  2000-08-03       Impact factor: 49.962

10.  Differential localization of myosin and myosin phosphatase subunits in smooth muscle cells and migrating fibroblasts.

Authors:  K Murata; K Hirano; E Villa-Moruzzi; D J Hartshorne; D L Brautigan
Journal:  Mol Biol Cell       Date:  1997-04       Impact factor: 4.138

View more
  16 in total

1.  Surfection: a new platform for transfected cell arrays.

Authors:  Fu-Hsiung Chang; Chien-Hsin Lee; Ming-Ta Chen; Chun-Chen Kuo; Yi-Lin Chiang; Chi-Ying Hang; Steve Roffler
Journal:  Nucleic Acids Res       Date:  2004-02-18       Impact factor: 16.971

2.  A universal plasmid library encoding all permutations of small interfering RNA.

Authors:  Meihong Chen; Lishu Zhang; Hong-Yan Zhang; Xiahui Xiong; Bo Wang; Quan Du; Bing Lu; Claes Wahlestedt; Zicai Liang
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-04       Impact factor: 11.205

Review 3.  The RGK family of GTP-binding proteins: regulators of voltage-dependent calcium channels and cytoskeleton remodeling.

Authors:  Robert N Correll; Chunyan Pang; Dana M Niedowicz; Brian S Finlin; Douglas A Andres
Journal:  Cell Signal       Date:  2007-11-06       Impact factor: 4.315

4.  Isolation and molecular characterization of Rem2 isoforms in the rainbow trout (Oncorhynchus mykiss): Tissue and central nervous system expression.

Authors:  David M Hollis; Yuri Sawa; Ashley Wagoner; Jason S Rawlings; Frederick W Goetz
Journal:  Comp Biochem Physiol B Biochem Mol Biol       Date:  2011-09-29       Impact factor: 2.231

5.  Rem2 in the bullfrog (Rana catesbeiana): Patterns of expression within the central nervous system and brain expression at different ontogenetic stages.

Authors:  Megan M DeRocher; Faris H Armaly; Cara J Lepore; David M Hollis
Journal:  Gene       Date:  2014-02-24       Impact factor: 3.688

6.  Loss-of-function screening by randomized intracellular antibodies: identification of hnRNP-K as a potential target for metastasis.

Authors:  Atsushi Inoue; Shinya Y Sawata; Kazunari Taira; Renu Wadhwa
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-04       Impact factor: 11.205

7.  An RNA-dependent protein kinase is involved in tunicamycin-induced apoptosis and Alzheimer's disease.

Authors:  Reiko Onuki; Yoshio Bando; Eigo Suyama; Taiichi Katayama; Hiroaki Kawasaki; Tadashi Baba; Masaya Tohyama; Kazunari Taira
Journal:  EMBO J       Date:  2004-02-05       Impact factor: 11.598

8.  Identification of VEGF-regulated genes associated with increased lung metastatic potential: functional involvement of tenascin-C in tumor growth and lung metastasis.

Authors:  A Calvo; R Catena; M S Noble; D Carbott; I Gil-Bazo; O Gonzalez-Moreno; J-I Huh; R Sharp; T-H Qiu; M R Anver; G Merlino; R B Dickson; M D Johnson; J E Green
Journal:  Oncogene       Date:  2008-05-26       Impact factor: 9.867

9.  Integrated Microfluidic System for Gene Silencing and Cell Migration.

Authors:  Zongbin Liu; Xin Han; Qing Zhou; Rui Chen; Shelby Fruge; Myeong Chan Jo; Yuan Ma; Ziyin Li; Kenji Yokoi; Lidong Qin
Journal:  Adv Biosyst       Date:  2017-05-18

10.  ALDH isozymes downregulation affects cell growth, cell motility and gene expression in lung cancer cells.

Authors:  Jan S Moreb; Henry V Baker; Lung-Ji Chang; Maria Amaya; M Cecilia Lopez; Blanca Ostmark; Wayne Chou
Journal:  Mol Cancer       Date:  2008-11-24       Impact factor: 27.401

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.