Literature DB >> 12705832

A point mutation in ribosomal protein L7/L12 reduces its ability to form a compact dimer structure and to assemble into the GTPase center.

Takaomi Nomura1, Ruriko Mochizuki, Eric R Dabbs, Yoshihiro Shimizu, Takuya Ueda, Akira Hachimori, Toshio Uchiumi.   

Abstract

An Escherichia coli mutant, LL103, harboring a mutation (Ser15 to Phe) in ribosomal protein L7/L12 was isolated among revertants of a streptomycin-dependent strain. In the crystal structure of the L7/L12 dimer, residue 15 within the N-terminal domain contacts the C-terminal domain of the partner monomer. We tested effects of the mutation on molecular assembly by biochemical approaches. Gel electrophoretic analysis showed that the Phe15-L7/L12 variant had reduced ability in binding to L10, an effect enhanced in the presence of 0.05% of nonionic detergent. Mobility of Phe15-L7/L12 on gel containing the detergent was very low compared to the wild-type proteins, presumably because of an extended structural state of the mutant L7/L12. Ribosomes isolated from LL103 cells contained a reduced amount of L7/L12 and showed low levels (15-30% of wild-type ribosomes) of activities dependent on elongation factors and in translation of natural mRNA. The ribosomal activity was completely recovered by addition of an excess amount of Phe15-L7/L12 to the ribosomes, suggesting that the mutant L7/L12 exerts normal functions when bound on the ribosome. The interaction of Ser15 with the C-terminal domain of the partner molecule seems to contribute to formation of the compact dimer structure and its efficient assembly into the ribosomal GTPase center. We propose a model relating compact and elongated forms of L7/L12 dimers. Phe15-L7/L12 provides a new tool for studying the functional structure of the homodimer.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12705832     DOI: 10.1021/bi027087g

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  4 in total

1.  In vitro reconstitution of the GTPase-associated centre of the archaebacterial ribosome: the functional features observed in a hybrid form with Escherichia coli 50S subunits.

Authors:  Takaomi Nomura; Kohji Nakano; Yasushi Maki; Takao Naganuma; Takashi Nakashima; Isao Tanaka; Makoto Kimura; Akira Hachimori; Toshio Uchiumi
Journal:  Biochem J       Date:  2006-06-15       Impact factor: 3.857

2.  Mechanism and rates of exchange of L7/L12 between ribosomes and the effects of binding EF-G.

Authors:  Stéphanie Deroo; Suk-Joon Hyung; Julien Marcoux; Yuliya Gordiyenko; Ravi Kiran Koripella; Suparna Sanyal; Carol V Robinson
Journal:  ACS Chem Biol       Date:  2012-04-18       Impact factor: 5.100

3.  Comparative genomic analyses of two segregating mutants reveal seven genes likely involved in resistance to Fusarium equiseti in soybean via whole genome re-sequencing.

Authors:  Liuping Zhang; Wenkun Huang; Deliang Peng; Shiming Liu
Journal:  Theor Appl Genet       Date:  2019-07-23       Impact factor: 5.699

4.  Stability of the 'L12 stalk' in ribosomes from mesophilic and (hyper)thermophilic Archaea and Bacteria.

Authors:  D Shcherbakov; M Dontsova; M Tribus; M Garber; W Piendl
Journal:  Nucleic Acids Res       Date:  2006-10-19       Impact factor: 16.971

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.