Literature DB >> 12702309

Polycistronic gene expression in yeast versus cryptic promoter elements.

Katrin Hecht1, James E Bailey, Wolfgang Minas.   

Abstract

Saccharomyces cerevisiae is a much preferred host for biotechnological applications. However, the expression of entire heterologous pathways, required for some potential products, is technically challenging in yeast. A possible tool would be polycistronic gene expression. Recent studies demonstrated that short 5' untranslated regions (5'UTRs) found upstream of certain genes support cap-independent translation in vitro. In this study 5'UTRs were used as linkers between genes in polycistronic constructs. Expression levels of genes located in the first, second and third position after a promoter were studied by replacing the respective gene by a promoterless green fluorescence protein (GFP) gene. S. cerevisiae transformed with these constructs was grown on different carbon sources and GFP expression was assayed. Our results demonstrate that (i) ribosomal read-through does not suffice for polycistronic gene expression in vivo, (ii) 5'TFIID and 5'HAP4 but not 5'L-A significantly improve the expression of a reporter gene located second in a bicistron, (iii) 5'TFIID, 5'HAP4 and 5'YAP1 but not 5'L-A can drive expression of a promoterless reporter gene, and (iv) expression driven from 5'TFIID, 5'HAP4 and 5'YAP1 is induced in the presence of raffinose or galactose but not in the presence of glucose. This implies that these elements unlike typical internal ribosome entry site-like structures contain small, potentially useful promoters which support carbon source-regulated expression.

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Year:  2002        PMID: 12702309     DOI: 10.1111/j.1567-1364.2002.tb00086.x

Source DB:  PubMed          Journal:  FEMS Yeast Res        ISSN: 1567-1356            Impact factor:   2.796


  8 in total

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Authors:  Santanu Raychaudhuri; Vanessa Fontanes; Rajeev Banerjee; Yana Bernavichute; Asim Dasgupta
Journal:  Biochem Biophys Res Commun       Date:  2006-10-02       Impact factor: 3.575

2.  Firefly luciferase gene contains a cryptic promoter.

Authors:  Václav Vopálenský; Tomás Masek; Ondrej Horváth; Blanka Vicenová; Martin Mokrejs; Martin Pospísek
Journal:  RNA       Date:  2008-08-12       Impact factor: 4.942

3.  Localization of a promoter in the putative internal ribosome entry site of the Saccharomyces cerevisiae TIF4631 gene.

Authors:  Valérie Vergé; Martin Vonlanthen; Jean-Michel Masson; Hans Trachsel; Michael Altmann
Journal:  RNA       Date:  2004-02       Impact factor: 4.942

4.  A small stem loop element directs internal initiation of the URE2 internal ribosome entry site in Saccharomyces cerevisiae.

Authors:  Lucas C Reineke; Anton A Komar; Mark G Caprara; William C Merrick
Journal:  J Biol Chem       Date:  2008-05-06       Impact factor: 5.157

5.  Regulation of expression by promoters versus internal ribosome entry site in the 5'-untranslated sequence of the human cyclin-dependent kinase inhibitor p27kip1.

Authors:  Zhaoqian Liu; Zizheng Dong; Baoguang Han; Youyun Yang; Yang Liu; Jian-Ting Zhang
Journal:  Nucleic Acids Res       Date:  2005-07-08       Impact factor: 16.971

6.  IRESite: the database of experimentally verified IRES structures (www.iresite.org).

Authors:  Martin Mokrejs; Václav Vopálenský; Ondrej Kolenaty; Tomás Masek; Zuzana Feketová; Petra Sekyrová; Barbora Skaloudová; Vítezslav Kríz; Martin Pospísek
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

7.  IRES-dependent translated genes in fungi: computational prediction, phylogenetic conservation and functional association.

Authors:  Esteban Peguero-Sanchez; Liliana Pardo-Lopez; Enrique Merino
Journal:  BMC Genomics       Date:  2015-12-15       Impact factor: 3.969

8.  Screening for functional IRESes using α-complementation system of β-galactosidase in Pichia pastoris.

Authors:  Yide Huang; Yafei Zhang; Suhuan Li; Ting Lin; Jingwen Wu; Yao Lin
Journal:  Biotechnol Biofuels       Date:  2019-12-27       Impact factor: 6.040

  8 in total

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