Literature DB >> 12693937

Galactose mutarotase: pH dependence of enzymatic mutarotation.

Jane A Beebe1, Abolfazl Arabshahi, James G Clifton, Dagmar Ringe, Gregory A Petsko, Perry A Frey.   

Abstract

Here we report pH dependence of kinetic parameters for the mutarotation of alpha-D-glucose catalyzed by galactose mutarotase (GalM) from Escherichia coli. The values of k(cat) and k(cat)/K(m) for the mutarotation of alpha-D-galactose were found to be 1.84 x 10(4) s(-1) and 4.6 x 10(6) M(-1) s(-1), respectively, at pH 7.0 and 27 degrees C. The corresponding values for alpha-D-glucose were 1.9 x 10(4) s(-1) and 5.0 x 10(5) M(-1) s(-1). Inasmuch as the value of k(cat)/K(m) for the reaction of alpha-D-galactose is 10 times that for alpha-D-glucose, and the diffusional rate constants should be essentially the same for the two sugars, the mutarotation of alpha-D-glucose should not be diffusion controlled. Therefore, pH-rate profiles should not be distorted by diffusion. The k(cat) for the mutarotation of alpha-D-glucose is independent of pH. Therefore, either the enzyme-substrate complexes do not undergo ionization of catalytic groups, or the rate-limiting step is neither mutarotation nor diffusion. The profile of log k(cat)/K(m) versus pH is a distorted bell-shaped curve, with slopes of +1 on the acid side and -2 on the alkaline side. The values of pK(a) are 6.0 and 7.5, and mutarotation depends on the ionization states of three functional groups in the free enzyme, one unprotonated and two protonated. On the acid side, ring opening of alpha-D-glucose limits the rate, and on the alkaline side, ring closure of the open-chain sugar limits the rate. A mutarotation mechanism is presented in which one of the catalytic groups shuttles a proton to and from the endocyclic oxygen and the other two shuttle protons to the anomeric oxygen atoms. In this mechanism, three catalytic groups overcome the problem of nonstereospecificity in mutarotation. The groups are postulated to be His 104, His 175, and Glu 309. Mutations of these residues grossly impair catalytic activity. Variants H104Q- and E309Q-GalM display sufficient activity to allow profiles of log k(cat)/K(m) versus pH to be constructed. Both profiles show breaks on the acid side corresponding to pK(a) values of 5.8 for H104Q and 6.3 for E309Q. Apparently, ring opening of alpha-D-glucose limits the rate at low pHs, but ring closure does not become rate limiting at pHs up to 8.5 in reactions of these variants.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12693937     DOI: 10.1021/bi020639a

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  6 in total

1.  Structural and functional characterization of the Clostridium perfringens N-acetylmannosamine-6-phosphate 2-epimerase essential for the sialic acid salvage pathway.

Authors:  Marie-Cécile Pélissier; Corinne Sebban-Kreuzer; Françoise Guerlesquin; James A Brannigan; Yves Bourne; Florence Vincent
Journal:  J Biol Chem       Date:  2014-10-15       Impact factor: 5.157

2.  Characterization of a galactokinase-positive recombinant strain of Streptococcus thermophilus.

Authors:  Katy Vaillancourt; Jean-Dominique LeMay; Maryse Lamoureux; Michel Frenette; Sylvain Moineau; Christian Vadeboncoeur
Journal:  Appl Environ Microbiol       Date:  2004-08       Impact factor: 4.792

3.  RhaU of Rhizobium leguminosarum is a rhamnose mutarotase.

Authors:  Jason S Richardson; Xavi Carpena; Jack Switala; Rosa Perez-Luque; Lynda J Donald; Peter C Loewen; Ivan J Oresnik
Journal:  J Bacteriol       Date:  2007-12-21       Impact factor: 3.490

4.  Galactose metabolism by Streptococcus mutans.

Authors:  Jacqueline Abranches; Yi-Ywan M Chen; Robert A Burne
Journal:  Appl Environ Microbiol       Date:  2004-10       Impact factor: 4.792

5.  Crystal structures and kinetic analyses of N-acetylmannosamine-6-phosphate 2-epimerases from Fusobacterium nucleatum and Vibrio cholerae.

Authors:  Lavanyaa Manjunath; Sai Rohit Guntupalli; Michael J Currie; Rachel A North; Renwick C J Dobson; Vinod Nayak; Ramaswamy Subramanian
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2018-06-28       Impact factor: 1.056

6.  Discovery and characterization of a sulfoquinovose mutarotase using kinetic analysis at equilibrium by exchange spectroscopy.

Authors:  Palika Abayakoon; James P Lingford; Yi Jin; Christopher Bengt; Gideon J Davies; Shenggen Yao; Ethan D Goddard-Borger; Spencer J Williams
Journal:  Biochem J       Date:  2018-04-16       Impact factor: 3.857

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.