Literature DB >> 12682365

Cloning and characterization of tRNA (m1A58) methyltransferase (TrmI) from Thermus thermophilus HB27, a protein required for cell growth at extreme temperatures.

Louis Droogmans1, Martine Roovers, Janusz M Bujnicki, Catherine Tricot, Thomas Hartsch, Victor Stalon, Henri Grosjean.   

Abstract

N1-methyladenosine (m1A) is found at position 58 in the T-loop of many tRNAs. In yeast, the formation of this modified nucleoside is catalyzed by the essential tRNA (m1A58) methyltransferase, a tetrameric enzyme that is composed of two types of subunits (Gcd14p and Gcd10p). In this report we describe the cloning, expression and characterization of a Gcd14p homolog from the hyperthermophilic bacterium Thermus thermophilus. The purified recombinant enzyme behaves as a homotetramer of 150 kDa by gel filtration and catalyzes the site- specific formation of m1A at position 58 of the T-loop of tRNA in the absence of any other complementary protein. S-adenosylmethionine is used as donor of the methyl group. Thus, we propose to name the bacterial enzyme TrmI and accordingly its structural gene trmI. These results provide a key evolutionary link between the functionally characterized two-component eukaryotic enzyme and the recently described crystal structure of an uncharacterized, putative homotetrameric methyltransferase Rv2118c from Mycobacterium tuberculosis. Interest ingly, inactivation of the T.thermophilus trmI gene results in a thermosensitive phenotype (growth defect at 80 degrees C), which suggests a role of the N1-methylation of tRNA adenosine-58 in adaptation of life to extreme temperatures.

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Year:  2003        PMID: 12682365      PMCID: PMC153742          DOI: 10.1093/nar/gkg314

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  40 in total

1.  Purification and characterization of tRNA(adenosine-1-)-methyltransferase from Thermus thermophilus HB27.

Authors:  N Yamazaki; H Hori; K Ozawa; S Nakanishi; T Ueda; I Kumagai; K Watanabe; K Nishikawa
Journal:  Nucleic Acids Symp Ser       Date:  1992

2.  A synthetic substrate for tRNA splicing.

Authors:  V M Reyes; J Abelson
Journal:  Anal Biochem       Date:  1987-10       Impact factor: 3.365

3.  2'-O-methylation and inosine formation in the wobble position of anticodon-substituted tRNA-Phe in a homologous yeast in vitro system.

Authors:  L Droogmans; H Grosjean
Journal:  Biochimie       Date:  1991 Jul-Aug       Impact factor: 4.079

4.  Sequence of tRNA(Asp) from Thermus thermophilus HB8.

Authors:  G Keith; M Yusupov; C Briand; D Moras; D Kern; C ] Brion C [corrected to Briand
Journal:  Nucleic Acids Res       Date:  1993-09-11       Impact factor: 16.971

5.  Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro.

Authors:  J R Sampson; O C Uhlenbeck
Journal:  Proc Natl Acad Sci U S A       Date:  1988-02       Impact factor: 11.205

6.  Substrate specificity of tRNA (adenine-1-)-methyltransferase from Thermus thermophilus HB27.

Authors:  N Yamazaki; H Hori; K Ozawa; S Nakanishi; T Ueda; I Kumagai; K Watanabe; K Nishikawa
Journal:  Biosci Biotechnol Biochem       Date:  1994-06       Impact factor: 2.043

7.  In vitro binding of the pleiotropic transcriptional regulatory protein, FruR, to the fru, pps, ace, pts and icd operons of Escherichia coli and Salmonella typhimurium.

Authors:  T M Ramseier; D Nègre; J C Cortay; M Scarabel; A J Cozzone; M H Saier
Journal:  J Mol Biol       Date:  1993-11-05       Impact factor: 5.469

8.  Insertional mutagenesis in the extreme thermophilic eubacteria Thermus thermophilus HB8.

Authors:  I Lasa; J R Castón; L A Fernández-Herrero; M A de Pedro; J Berenguer
Journal:  Mol Microbiol       Date:  1992-06       Impact factor: 3.501

9.  Thermus thermophilus 16S rRNA is transcribed from an isolated transcription unit.

Authors:  R K Hartmann; V A Erdmann
Journal:  J Bacteriol       Date:  1989-06       Impact factor: 3.490

10.  The role of posttranscriptional modification in stabilization of transfer RNA from hyperthermophiles.

Authors:  J A Kowalak; J J Dalluge; J A McCloskey; K O Stetter
Journal:  Biochemistry       Date:  1994-06-28       Impact factor: 3.162

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  51 in total

1.  A primordial RNA modification enzyme: the case of tRNA (m1A) methyltransferase.

Authors:  Martine Roovers; Johan Wouters; Janusz M Bujnicki; Catherine Tricot; Victor Stalon; Henri Grosjean; Louis Droogmans
Journal:  Nucleic Acids Res       Date:  2004-01-22       Impact factor: 16.971

Review 2.  Identification of genes encoding tRNA modification enzymes by comparative genomics.

Authors:  Valérie de Crécy-Lagard
Journal:  Methods Enzymol       Date:  2007       Impact factor: 1.600

3.  Structural characterization of B. subtilis m1A22 tRNA methyltransferase TrmK: insights into tRNA recognition.

Authors:  Clément Dégut; Martine Roovers; Pierre Barraud; Franck Brachet; André Feller; Valéry Larue; Abdalla Al Refaii; Joël Caillet; Louis Droogmans; Carine Tisné
Journal:  Nucleic Acids Res       Date:  2019-05-21       Impact factor: 16.971

4.  tRNA m7G methyltransferase Trm8p/Trm82p: evidence linking activity to a growth phenotype and implicating Trm82p in maintaining levels of active Trm8p.

Authors:  Andrei Alexandrov; Elizabeth J Grayhack; Eric M Phizicky
Journal:  RNA       Date:  2005-04-05       Impact factor: 4.942

5.  Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus.

Authors:  Hideto Takami; Yoshihiro Takaki; Gab-Joo Chee; Shinro Nishi; Shigeru Shimamura; Hiroko Suzuki; Satomi Matsui; Ikuo Uchiyama
Journal:  Nucleic Acids Res       Date:  2004-12-01       Impact factor: 16.971

6.  The tRNA recognition mechanism of folate/FAD-dependent tRNA methyltransferase (TrmFO).

Authors:  Ryota Yamagami; Koki Yamashita; Hiroshi Nishimasu; Chie Tomikawa; Anna Ochi; Chikako Iwashita; Akira Hirata; Ryuichiro Ishitani; Osamu Nureki; Hiroyuki Hori
Journal:  J Biol Chem       Date:  2012-10-24       Impact factor: 5.157

7.  Trmt61B is a methyltransferase responsible for 1-methyladenosine at position 58 of human mitochondrial tRNAs.

Authors:  Takeshi Chujo; Tsutomu Suzuki
Journal:  RNA       Date:  2012-10-24       Impact factor: 4.942

8.  Bacterial lifestyle in a deep-sea hydrothermal vent chimney revealed by the genome sequence of the thermophilic bacterium Deferribacter desulfuricans SSM1.

Authors:  Yoshihiro Takaki; Shigeru Shimamura; Satoshi Nakagawa; Yasuo Fukuhara; Hiroshi Horikawa; Akiho Ankai; Takeshi Harada; Akira Hosoyama; Akio Oguchi; Shigehiro Fukui; Nobuyuki Fujita; Hideto Takami; Ken Takai
Journal:  DNA Res       Date:  2010-02-26       Impact factor: 4.458

9.  Insights into the hyperthermostability and unusual region-specificity of archaeal Pyrococcus abyssi tRNA m1A57/58 methyltransferase.

Authors:  Amandine Guelorget; Martine Roovers; Vincent Guérineau; Carole Barbey; Xuan Li; Béatrice Golinelli-Pimpaneau
Journal:  Nucleic Acids Res       Date:  2010-05-18       Impact factor: 16.971

10.  N7-Methylguanine at position 46 (m7G46) in tRNA from Thermus thermophilus is required for cell viability at high temperatures through a tRNA modification network.

Authors:  Chie Tomikawa; Takashi Yokogawa; Tamotsu Kanai; Hiroyuki Hori
Journal:  Nucleic Acids Res       Date:  2009-11-24       Impact factor: 16.971

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