Literature DB >> 12676964

Allosteric interactions and bifunctionality make the response of glutamine synthetase cascade system of Escherichia coli robust and ultrasensitive.

Vivek K Mutalik1, Parag Shah, K V Venkatesh.   

Abstract

Glutamine synthetase (GS) regulation in Escherichia coli by reversible covalent modification cycles is a prototype of signal transduction by enzyme cascades. Such enzyme cascades are known to exhibit ultrasensitive response to primary stimuli and act as signal integration systems. Here, we have quantified GS bicyclic cascade based on steady state analysis by evaluating Hill coefficient. We demonstrate that adenylylation of GS with glutamine as input is insensitive to total enzyme concentrations of GS, uridylyltransferase/uridylyl-removing enzyme, regulatory protein PII, and adenylyltransferase/adenylyl-removing enzyme. This robust response of GS adenylylation is also observed for change in system parameters. From numerical analyses, we show that the robust ultrasensitive response of bicyclic cascade is because of allosteric interactions of glutamine and 2-ketoglutarate, bifunctionality of converter enzymes, and closed loop bicyclic cascade structure. By system level quantification of the GS bicyclic cascade, we conclude that such a robust response may help the cell in adapting to different carbon and nitrogen status.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12676964     DOI: 10.1074/jbc.M300129200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  8 in total

1.  Robustness in Escherichia coli glutamate and glutamine synthesis studied by a kinetic model.

Authors:  Aníbal Lodeiro; Augusto Melgarejo
Journal:  J Biol Phys       Date:  2008-08-30       Impact factor: 1.365

2.  Protection elicited by two glutamine auxotrophs of Mycobacterium tuberculosis and in vivo growth phenotypes of the four unique glutamine synthetase mutants in a murine model.

Authors:  Sunhee Lee; Bo-Young Jeon; Svetoslav Bardarov; Mei Chen; Sheldon L Morris; William R Jacobs
Journal:  Infect Immun       Date:  2006-11       Impact factor: 3.441

3.  Modeling the role of covalent enzyme modification in Escherichia coli nitrogen metabolism.

Authors:  Philip B Kidd; Ned S Wingreen
Journal:  Phys Biol       Date:  2010-01-07       Impact factor: 2.583

4.  Achieving optimal growth through product feedback inhibition in metabolism.

Authors:  Sidhartha Goyal; Jie Yuan; Thomas Chen; Joshua D Rabinowitz; Ned S Wingreen
Journal:  PLoS Comput Biol       Date:  2010-06-03       Impact factor: 4.475

5.  Flux balance analysis of ammonia assimilation network in E. coli predicts preferred regulation point.

Authors:  Lu Wang; Luhua Lai; Qi Ouyang; Chao Tang
Journal:  PLoS One       Date:  2011-01-25       Impact factor: 3.240

6.  Quantification of the glycogen cascade system: the ultrasensitive responses of liver glycogen synthase and muscle phosphorylase are due to distinctive regulatory designs.

Authors:  Vivek K Mutalik; K V Venkatesh
Journal:  Theor Biol Med Model       Date:  2005-05-20       Impact factor: 2.432

7.  GlnK Facilitates the Dynamic Regulation of Bacterial Nitrogen Assimilation.

Authors:  Adam Gosztolai; Jörg Schumacher; Volker Behrends; Jacob G Bundy; Franziska Heydenreich; Mark H Bennett; Martin Buck; Mauricio Barahona
Journal:  Biophys J       Date:  2017-05-23       Impact factor: 4.033

Review 8.  Nitrogen assimilation in Escherichia coli: putting molecular data into a systems perspective.

Authors:  Wally C van Heeswijk; Hans V Westerhoff; Fred C Boogerd
Journal:  Microbiol Mol Biol Rev       Date:  2013-12       Impact factor: 11.056

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.