Literature DB >> 12676558

Hypermutable minisatellites, a human affair?

Philippe R J Bois1.   

Abstract

Minisatellites are a class of highly polymorphic GC-rich tandem repeats. They include some of the most variable loci in the human genome, with mutation rates ranging from 0.5% to >20% per generation. Structurally, they consist of 10- to 100-bp intermingled variant repeats, making them ideal tools for dissecting mechanisms of instability at tandem repeats. Distinct mutation processes generate rare intra-allelic somatic events and frequent complex conversion-like germline mutations in these repeats. Furthermore, turnover of repeats at human minisatellites is controlled by intense recombinational activity in DNA flanking the repeat array. Surprisingly, whereas other mammalian genomes possess minisatellite-like sequences, hypermutable loci have not been identified that suggest human-specific turnover processes at minisatellite arrays. Attempts to transfer minisatellite germline instability to the mouse have failed. However, yeast models are now revealing valuable information regarding the mechanisms regulating instability at these tandem repeats. Finally, minisatellites and tandem repeats provide exquisitely sensitive molecular tools to detect genomic insults such as ionizing radiation exposure. Surprisingly, by a mechanism that remains elusive, there are transgenerational increases in minisatellite instability.

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Year:  2003        PMID: 12676558     DOI: 10.1016/s0888-7543(03)00021-1

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  13 in total

1.  Comparative analyses of human single- and multilocus tandem repeats.

Authors:  Darren Ames; Nick Murphy; Tim Helentjaris; Nina Sun; Vicki Chandler
Journal:  Genetics       Date:  2008-06-18       Impact factor: 4.562

Review 2.  Role of the 5-HTTLPR and SNP Promoter Polymorphisms on Serotonin Transporter Gene Expression: a Closer Look at Genetic Architecture and In Vitro Functional Studies of Common and Uncommon Allelic Variants.

Authors:  Sandra Iurescia; Davide Seripa; Monica Rinaldi
Journal:  Mol Neurobiol       Date:  2015-10-13       Impact factor: 5.590

3.  Genomic expansion of the Bov-A2 retroposon relating to phylogeny and breed management.

Authors:  Jun-ichi Onami; Masato Nikaido; Hideyuki Mannen; Norihiro Okada
Journal:  Mamm Genome       Date:  2007-04-10       Impact factor: 2.957

Review 4.  The Utility of Repetitive Cell-Free DNA in Cancer Liquid Biopsies.

Authors:  Ugur Gezer; Abel J Bronkhorst; Stefan Holdenrieder
Journal:  Diagnostics (Basel)       Date:  2022-06-01

5.  Variable-number-of-tandem-repeats analysis of genetic diversity in Pasteuria ramosa.

Authors:  L Mouton; D Ebert
Journal:  Curr Microbiol       Date:  2008-01-24       Impact factor: 2.188

6.  The genomic landscape of short insertion and deletion polymorphisms in the chicken (Gallus gallus) Genome: a high frequency of deletions in tandem duplicates.

Authors:  Mikael Brandström; Hans Ellegren
Journal:  Genetics       Date:  2007-05-16       Impact factor: 4.562

7.  Instability of the octarepeat region of the human prion protein gene.

Authors:  Baiya Li; Liuting Qing; Jianqun Yan; Qingzhong Kong
Journal:  PLoS One       Date:  2011-10-19       Impact factor: 3.240

8.  Mutation at the human D1S80 minisatellite locus.

Authors:  Kuppareddi Balamurugan; Martin L Tracey; Uwe Heine; George C Maha; George T Duncan
Journal:  ScientificWorldJournal       Date:  2012-05-03

9.  Transposable elements are a significant contributor to tandem repeats in the human genome.

Authors:  Musaddeque Ahmed; Ping Liang
Journal:  Comp Funct Genomics       Date:  2012-06-24

10.  Severe neurological phenotypes of Q129 DRPLA transgenic mice serendipitously created by en masse expansion of CAG repeats in Q76 DRPLA mice.

Authors:  Toshiya Sato; Masami Miura; Mitsunori Yamada; Takayuki Yoshida; Jonathan D Wood; Ikuru Yazawa; Masao Masuda; Takeo Suzuki; Ryong-Moon Shin; Hau-Jie Yau; Fu-Chin Liu; Takayoshi Shimohata; Osamu Onodera; Christopher A Ross; Motoya Katsuki; Hitoshi Takahashi; Masanobu Kano; Toshihiko Aosaki; Shoji Tsuji
Journal:  Hum Mol Genet       Date:  2008-11-27       Impact factor: 6.150

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