Literature DB >> 12676109

RNA sensors and riboswitches: self-regulating messages.

Eric C Lai1.   

Abstract

Recent years have seen the discovery of myriad new regulatory and catalytic functions for RNA. A series of new studies have now demonstrated that certain RNA sequences can directly sense ambient temperature or any of a variety of small molecule metabolites. Remarkably, these sensors allow associated mRNAs to regulate their own transcription or translation accordingly, without the need for regulatory proteins.

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Year:  2003        PMID: 12676109     DOI: 10.1016/s0960-9822(03)00203-3

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  22 in total

1.  Differential subnuclear localization of RNA strands of opposite polarity derived from an autonomously replicating viroid.

Authors:  Yijun Qi; Biao Ding
Journal:  Plant Cell       Date:  2003-10-10       Impact factor: 11.277

2.  The robustness of naturally and artificially selected nucleic acid secondary structures.

Authors:  Lauren Ancel Meyers; Jennifer F Lee; Matthew Cowperthwaite; Andrew D Ellington
Journal:  J Mol Evol       Date:  2004-06       Impact factor: 2.395

3.  RNAcentral: A vision for an international database of RNA sequences.

Authors:  Alex Bateman; Shipra Agrawal; Ewan Birney; Elspeth A Bruford; Janusz M Bujnicki; Guy Cochrane; James R Cole; Marcel E Dinger; Anton J Enright; Paul P Gardner; Daniel Gautheret; Sam Griffiths-Jones; Jen Harrow; Javier Herrero; Ian H Holmes; Hsien-Da Huang; Krystyna A Kelly; Paul Kersey; Ana Kozomara; Todd M Lowe; Manja Marz; Simon Moxon; Kim D Pruitt; Tore Samuelsson; Peter F Stadler; Albert J Vilella; Jan-Hinnerk Vogel; Kelly P Williams; Mathew W Wright; Christian Zwieb
Journal:  RNA       Date:  2011-09-22       Impact factor: 4.942

4.  Unique folding of precursor microRNAs: quantitative evidence and implications for de novo identification.

Authors:  Stanley Ng Kwang Loong; Santosh K Mishra
Journal:  RNA       Date:  2006-12-28       Impact factor: 4.942

5.  A loop loop interaction and a K-turn motif located in the lysine aptamer domain are important for the riboswitch gene regulation control.

Authors:  Simon Blouin; Daniel A Lafontaine
Journal:  RNA       Date:  2007-06-21       Impact factor: 4.942

6.  Arabidopsis mRNA secondary structure correlates with protein function and domains.

Authors:  Lee Vandivier; Fan Li; Qi Zheng; Matthew Willmann; Ying Chen; Brian Gregory
Journal:  Plant Signal Behav       Date:  2013-04-19

7.  Thermodynamic examination of the pyrophosphate sensor helix in the thiamine pyrophosphate riboswitch.

Authors:  Stephanie Furniss; Neena Grover
Journal:  RNA       Date:  2011-03-02       Impact factor: 4.942

Review 8.  RNA sensors: novel regulators of gene expression.

Authors:  Raymond Kaempfer
Journal:  EMBO Rep       Date:  2003-11       Impact factor: 8.807

9.  Natural variability in S-adenosylmethionine (SAM)-dependent riboswitches: S-box elements in bacillus subtilis exhibit differential sensitivity to SAM In vivo and in vitro.

Authors:  Jerneja Tomsic; Brooke A McDaniel; Frank J Grundy; Tina M Henkin
Journal:  J Bacteriol       Date:  2007-11-26       Impact factor: 3.490

10.  A combinatorial interplay among the 1-aminocyclopropane-1-carboxylate isoforms regulates ethylene biosynthesis in Arabidopsis thaliana.

Authors:  Atsunari Tsuchisaka; Guixia Yu; Hailing Jin; Jose M Alonso; Joseph R Ecker; Xiaoming Zhang; Shang Gao; Athanasios Theologis
Journal:  Genetics       Date:  2009-09-14       Impact factor: 4.562

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