Literature DB >> 12671735

MICB typing by PCR amplification with sequence specific primers.

Segundo González1, Sandra Rodríguez-Rodero, Jesús Martínez-Borra, Antonio López-Vázquez, Luis Rodrigo, Carlos López-Larrea.   

Abstract

MICB is a member of the MIC (MHC class I chain-related gene) family. Sixteen MICB alleles have been described; however, the functional relevance and population distribution of MICB alleles or their potential association to disease has not yet been evaluated. In this study, we have developed a PCR system using sequence-specific primers (PCR-SSP) that allows unambiguous amplification of all MICB alleles. This approach has been applied to type 100 healthy unrelated individuals from the Spanish population. The extent of polymorphism in this population is lower than that initially expected, and only nine alleles were detected. The alleles MICB01021 (46%), MICB0103101 (13.5%), MICB0104 (13.5%) and MICB0106 (12.5%) were found to be the most frequent alleles. HLA-B and MICA transmembrane polymorphism typing were also performed in this population. Our data showed that MICB is in linkage disequilibrium with MICA and even with HLA-B. Thus, the linkage disequilibrium with MICA and HLA-B suggests that MICB is a potential candidate for those diseases classically associated with HLA class I alleles.

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Year:  2003        PMID: 12671735     DOI: 10.1007/s00251-002-0533-x

Source DB:  PubMed          Journal:  Immunogenetics        ISSN: 0093-7711            Impact factor:   2.846


  32 in total

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2.  On the MICA deleted-MICB null, HLA-B*4801 haplotype.

Authors:  M Ota; S Bahram; Y Katsuyama; S Saito; Y Nose; M Sada; H Ando; H Inoko
Journal:  Tissue Antigens       Date:  2000-09

3.  Further polymorphism of the MICA gene.

Authors:  M Pérez-Rodríguez; J R Argüello; G Fischer; A Corell; S T Cox; J Robinson; E Hossain; A McWhinnie; P J Travers; S G E Marsh; J Alejandro Madrigal
Journal:  Eur J Immunogenet       Date:  2002-02

4.  HLA-DR typing by PCR amplification with sequence-specific primers (PCR-SSP) in 2 hours: an alternative to serological DR typing in clinical practice including donor-recipient matching in cadaveric transplantation.

Authors:  O Olerup; H Zetterquist
Journal:  Tissue Antigens       Date:  1992-05

5.  An insulin response element in the glyceraldehyde-3-phosphate dehydrogenase gene binds a nuclear protein induced by insulin in cultured cells and by nutritional manipulations in vivo.

Authors:  N Nasrin; L Ercolani; M Denaro; X F Kong; I Kang; M Alexander
Journal:  Proc Natl Acad Sci U S A       Date:  1990-07       Impact factor: 11.205

6.  Nucleotide sequencing analysis of the 146-kilobase segment around the IkBL and MICA genes at the centromeric end of the HLA class I region.

Authors:  T Shiina; G Tamiya; A Oka; T Yamagata; N Yamagata; E Kikkawa; K Goto; N Mizuki; K Watanabe; Y Fukuzumi; S Taguchi; C Sugawara; A Ono; L Chen; M Yamazaki; H Tashiro; A Ando; T Ikemura; M Kimura; H Inoko
Journal:  Genomics       Date:  1998-02-01       Impact factor: 5.736

7.  Comprehensive, serologically equivalent DNA typing for HLA-B by PCR using sequence-specific primers (PCR-SSP).

Authors:  M Bunce; G C Fanning; K I Welsh
Journal:  Tissue Antigens       Date:  1995-02

8.  Nucleotide sequence of a human MHC class I MICB cDNA.

Authors:  S Bahram; T Spies
Journal:  Immunogenetics       Date:  1996       Impact factor: 2.846

9.  Sequencing-based typing reveals six novel MHC class I chain-related gene B (MICB) alleles.

Authors:  C J Visser; M G Tilanus; V Schaeffer; Z Tatari; R Tamouza; A Janin; D Charron
Journal:  Tissue Antigens       Date:  1998-06

10.  A second lineage of mammalian major histocompatibility complex class I genes.

Authors:  S Bahram; M Bresnahan; D E Geraghty; T Spies
Journal:  Proc Natl Acad Sci U S A       Date:  1994-07-05       Impact factor: 11.205

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  6 in total

1.  MICB0106 gene polymorphism is associated with ulcerative colitis in central China.

Authors:  Yi Li; Bing Xia; Min Lü; Liuqing Ge; Xiaolian Zhang
Journal:  Int J Colorectal Dis       Date:  2009-08-07       Impact factor: 2.571

2.  Distribution of MICB diversity in the Zhejiang Han population: PCR sequence-based typing for exons 2-6 and identification of five novel MICB alleles.

Authors:  Yanling Ying; Yanmin He; Sudan Tao; Zhedong Han; Wei Wang; Nanying Chen; Junjun He; Wei Zhang; Ji He; Faming Zhu; Hangjun Lv
Journal:  Immunogenetics       Date:  2013-04-03       Impact factor: 2.846

3.  Gender-specific associations between MICA-STR and nasopharyngeal carcinoma in a southern Chinese Han population.

Authors:  Wei Tian; Xiao-Min Zeng; Li-Xin Li; He-Kun Jin; Qi-Zhi Luo; Fan Wang; Shi-Shi Guo; Ya Cao
Journal:  Immunogenetics       Date:  2006-03-18       Impact factor: 2.846

4.  Associations of MICB with cervical cancer in north-eastern Thais: identification of major histocompatibility complex class I chain-related gene B motifs influencing natural killer cell activation.

Authors:  A Jumnainsong; P Jearanaikoon; S Khahmahpahte; W Wongsena; A V Romphruk; B Chumworathayi; K Vaeteewoottacharn; M Ponglikitmongkol; A Romphruk; C Leelayuwat
Journal:  Clin Exp Immunol       Date:  2008-05-26       Impact factor: 4.330

5.  Production and characterization of monoclonal antibodies against major histocompatibility complex class I chain-related gene A.

Authors:  W Wongsena; G Sconocchia; H S Cho; C-C Chang; X Wang; K Klumkrathok; S Ferrone; C Leelayuwat
Journal:  Tissue Antigens       Date:  2008-11

6.  MICB Allele Genotyping on Microarrays by Improving the Specificity of Extension Primers.

Authors:  In-Cheol Baek; Jung-Pil Jang; Eun-Jeong Choi; Tai-Gyu Kim
Journal:  PLoS One       Date:  2015-11-16       Impact factor: 3.240

  6 in total

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