Literature DB >> 12670968

Identification and characterization of a mandelamide hydrolase and an NAD(P)+-dependent benzaldehyde dehydrogenase from Pseudomonas putida ATCC 12633.

Michael J McLeish1, Malea M Kneen, Kota N Gopalakrishna, Carolyn W Koo, Patricia C Babbitt, John A Gerlt, George L Kenyon.   

Abstract

The enzymes of the mandelate metabolic pathway permit Pseudomonas putida ATCC 12633 to utilize either or both enantiomers of mandelate as the sole carbon source. The genes encoding the mandelate pathway were found to lie on a single 10.5-kb restriction fragment. Part of that fragment was shown to contain the genes coding for mandelate racemase, mandelate dehydrogenase, and benzoylformate decarboxylase arranged in an operon. Here we report the sequencing of the remainder of the restriction fragment, which revealed three further open reading frames, denoted mdlX, mdlY, and mdlD. All were transcribed in the opposite direction from the genes of the mdlABC operon. Sequence alignments suggested that the open reading frames encoded a regulatory protein (mdlX), a member of the amidase signature family (mdlY), and an NAD(P)(+)-dependent dehydrogenase (mdlD). The mdlY and mdlD genes were isolated and expressed in Escherichia coli, and the purified gene products were characterized as a mandelamide hydrolase and an NAD(P)(+)-dependent benzaldehyde dehydrogenase, respectively.

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Year:  2003        PMID: 12670968      PMCID: PMC152609          DOI: 10.1128/JB.185.8.2451-2456.2003

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  35 in total

1.  Structure of malonamidase E2 reveals a novel Ser-cisSer-Lys catalytic triad in a new serine hydrolase fold that is prevalent in nature.

Authors:  Sejeong Shin; Tae-Hee Lee; Nam-Chul Ha; Hyun Min Koo; So-Yeon Kim; Heung-Soo Lee; Yu Sam Kim; Byung-Ha Oh
Journal:  EMBO J       Date:  2002-06-03       Impact factor: 11.598

2.  Steady-state kinetic mechanism of the NADP+- and NAD+-dependent reactions catalysed by betaine aldehyde dehydrogenase from Pseudomonas aeruginosa.

Authors:  R Velasco-García; L González-Segura; R A Muñoz-Clares
Journal:  Biochem J       Date:  2000-12-15       Impact factor: 3.857

3.  Induction and multi-sensitive end-product repression in two converging pathways degrading aromatic substances in Pseudomonas fluorescens.

Authors:  I L Stevenson; J Mandelstam
Journal:  Biochem J       Date:  1965-08       Impact factor: 3.857

4.  Fatty acid amide hydrolase competitively degrades bioactive amides and esters through a nonconventional catalytic mechanism.

Authors:  M P Patricelli; B F Cravatt
Journal:  Biochemistry       Date:  1999-10-26       Impact factor: 3.162

5.  Identification of active-site residues in Bradyrhizobium japonicum malonamidase E2.

Authors:  H M Koo; S O Choi; H M Kim; Y S Kim
Journal:  Biochem J       Date:  2000-07-15       Impact factor: 3.857

6.  Identification of two serine residues involved in catalysis by fatty acid amide hydrolase.

Authors:  R L Omeir; G Arreaza; D G Deutsch
Journal:  Biochem Biophys Res Commun       Date:  1999-10-22       Impact factor: 3.575

7.  Shifting the NAD/NADP preference in class 3 aldehyde dehydrogenase.

Authors:  J Perozich; I Kuo; B C Wang; J S Boesch; R Lindahl; J Hempel
Journal:  Eur J Biochem       Date:  2000-10

8.  Clarifying the catalytic roles of conserved residues in the amidase signature family.

Authors:  M P Patricelli; B F Cravatt
Journal:  J Biol Chem       Date:  2000-06-23       Impact factor: 5.157

9.  Aldehyde dehydrogenase. Maintaining critical active site geometry at motif 8 in the class 3 enzyme.

Authors:  J Hempel; I Kuo; J Perozich; B C Wang; R Lindahl; H Nicholas
Journal:  Eur J Biochem       Date:  2001-02

10.  Synthesis of the enzymes of the mandelate pathway by Pseudomonas putida. I. Synthesis of enzymes by the wild type.

Authors:  G D Hegeman
Journal:  J Bacteriol       Date:  1966-03       Impact factor: 3.490

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  2 in total

1.  Structure and mechanism of benzaldehyde dehydrogenase from Pseudomonas putida ATCC 12633, a member of the Class 3 aldehyde dehydrogenase superfamily.

Authors:  Megan P D Zahniser; Shreenath Prasad; Malea M Kneen; Cheryl A Kreinbring; Gregory A Petsko; Dagmar Ringe; Michael J McLeish
Journal:  Protein Eng Des Sel       Date:  2017-03-01       Impact factor: 1.650

2.  Revealing the Mechanism of Huazhi Rougan Granule in the Treatment of Nonalcoholic Fatty Liver Through Intestinal Flora Based on 16S rRNA, Metagenomic Sequencing and Network Pharmacology.

Authors:  Yingying Liu; Yingying Tan; Jiaqi Huang; Chao Wu; Xiaotian Fan; Antony Stalin; Shan Lu; Haojia Wang; Jingyuan Zhang; Fanqin Zhang; Zhishan Wu; Bing Li; Zhihong Huang; Meilin Chen; Guoliang Cheng; Yanfang Mou; Jiarui Wu
Journal:  Front Pharmacol       Date:  2022-04-26       Impact factor: 5.988

  2 in total

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