Literature DB >> 12669983

The cohesive metaschema: a higher-level abstraction of the UMLS Semantic Network.

Yehoshua Perl1, Zong Chen, Michael Halper, James Geller, Li Zhang, Yi Peng.   

Abstract

The Unified Medical Language System (UMLS) joins together a group of established medical terminologies in a unified knowledge representation framework. Two major resources of the UMLS are its Metathesaurus, containing a large number of concepts, and the Semantic Network (SN), containing semantic types and forming an abstraction of the Metathesaurus. However, the SN itself is large and complex and may still be difficult to view and comprehend. Our structural partitioning technique partitions the SN into structurally uniform sets of semantic types based on the distribution of the relationships within the SN. An enhancement of the structural partition results in cohesive, singly rooted sets of semantic types. Each such set is named after its root which represents the common nature of the group. These sets of semantic types are represented by higher-level components called metasemantic types. A network, called a metaschema, which consists of the meta-semantic types connected by hierarchical and semantic relationships is obtained and provides an abstract view supporting orientation to the SN. The metaschema is utilized to audit the UMLS classifications. We present a set of graphical views of the SN based on the metaschema to help in user orientation to the SN. A study compares the cohesive metaschema to metaschemas derived semantically by UMLS experts.

Mesh:

Year:  2002        PMID: 12669983     DOI: 10.1016/s1532-0464(02)00528-2

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  14 in total

1.  Integrating a hypernymic proposition interpreter into a semantic processor for biomedical texts.

Authors:  Marcelo Fiszman; Thomas C Rindflesch; Halil Kilicoglu
Journal:  AMIA Annu Symp Proc       Date:  2003

2.  Representation of nursing terminologies in UMLS.

Authors:  Tae Youn Kim; Amy Coenen; Nicholas Hardiker; Claudia C Bartz
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

3.  Semantic mappings and locality of nursing diagnostic concepts in UMLS.

Authors:  Tae Youn Kim; Amy Coenen; Nicholas Hardiker
Journal:  J Biomed Inform       Date:  2011-09-18       Impact factor: 6.317

4.  Auditing as part of the terminology design life cycle.

Authors:  Hua Min; Yehoshua Perl; Yan Chen; Michael Halper; James Geller; Yue Wang
Journal:  J Am Med Inform Assoc       Date:  2006-08-23       Impact factor: 4.497

Review 5.  A review of auditing methods applied to the content of controlled biomedical terminologies.

Authors:  Xinxin Zhu; Jung-Wei Fan; David M Baorto; Chunhua Weng; James J Cimino
Journal:  J Biomed Inform       Date:  2009-03-12       Impact factor: 6.317

6.  Complexity measures to track the evolution of a SNOMED hierarchy.

Authors:  Duo Wei; Yue Wang; Yehoshua Perl; Junchuan Xu; Michael Halper; Kent A Spackman; Kent Spackman
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

7.  Rule-based support system for multiple UMLS semantic type assignments.

Authors:  James Geller; Zhe He; Yehoshua Perl; C Paul Morrey; Julia Xu
Journal:  J Biomed Inform       Date:  2012-10-03       Impact factor: 6.317

Review 8.  Abstraction networks for terminologies: Supporting management of "big knowledge".

Authors:  Michael Halper; Huanying Gu; Yehoshua Perl; Christopher Ochs
Journal:  Artif Intell Med       Date:  2015-04-02       Impact factor: 5.326

9.  An enriched unified medical language system semantic network with a multiple subsumption hierarchy.

Authors:  Li Zhang; Yehoshua Perl; Michael Halper; James Geller; James J Cimino
Journal:  J Am Med Inform Assoc       Date:  2004-02-05       Impact factor: 4.497

10.  The Neighborhood Auditing Tool: a hybrid interface for auditing the UMLS.

Authors:  C Paul Morrey; James Geller; Michael Halper; Yehoshua Perl
Journal:  J Biomed Inform       Date:  2009-06       Impact factor: 6.317

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