Literature DB >> 12667838

Spatiotemporal analysis of optical imaging data.

A Sornborger1, C Sailstad, E Kaplan, L Sirovich.   

Abstract

Previous methods for analyzing optical imaging data have relied heavily on temporal averaging. However, response dynamics are rich sources of information. Here, we develop and present a method that combines principal component analysis and multitaper harmonic analysis to extract the statistically significant spatial and temporal response from optical imaging data. We apply the method to both simulated data and experimental optical imaging data from the cat primary visual cortex.

Mesh:

Year:  2003        PMID: 12667838     DOI: 10.1016/s1053-8119(02)00045-9

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  7 in total

1.  Quantification of optical images of cortical responses for inferring functional maps.

Authors:  Gopathy Purushothaman; Ilya Khaytin; Vivien A Casagrande
Journal:  J Neurophysiol       Date:  2009-02-18       Impact factor: 2.714

2.  Dimensional reduction of a V1 ring model with simple and complex cells.

Authors:  Cong Wang; Louis Tao
Journal:  J Comput Neurosci       Date:  2014-07-27       Impact factor: 1.621

3.  A multivariate, multitaper approach to detecting and estimating harmonic response in cortical optical imaging data.

Authors:  A T Sornborger; T Yokoo
Journal:  J Neurosci Methods       Date:  2011-09-29       Impact factor: 2.390

4.  Bimodal modulation and continuous stimulation in optical imaging to map direction selectivity.

Authors:  M P Vanni; J Provost; C Casanova; F Lesage
Journal:  Neuroimage       Date:  2009-09-25       Impact factor: 6.556

5.  Denoising two-photon calcium imaging data.

Authors:  Wasim Q Malik; James Schummers; Mriganka Sur; Emery N Brown
Journal:  PLoS One       Date:  2011-06-07       Impact factor: 3.240

6.  Improving voltage-sensitive dye imaging: with a little help from computational approaches.

Authors:  Sandrine Chemla; Lyle Muller; Alexandre Reynaud; Sylvain Takerkart; Alain Destexhe; Frédéric Chavane
Journal:  Neurophotonics       Date:  2017-05-19       Impact factor: 3.593

7.  Vobi One: a data processing software package for functional optical imaging.

Authors:  Sylvain Takerkart; Philippe Katz; Flavien Garcia; Sébastien Roux; Alexandre Reynaud; Frédéric Chavane
Journal:  Front Neurosci       Date:  2014-01-24       Impact factor: 4.677

  7 in total

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