Literature DB >> 12667087

The mechanism of Ras GTPase activation by neurofibromin.

Robert A Phillips1, Jackie L Hunter, John F Eccleston, Martin R Webb.   

Abstract

Individual rate constants have been determined for each step of the Ras.GTP hydrolysis mechanism, activated by neurofibromin. Fluorescence intensity and anisotropy stopped-flow measurements used the fluorescent GTP analogue, mantGTP (2'(3')-O-(N-methylanthraniloyl)GTP), to determine rate constants for binding and release of neurofibromin. Quenched flow measurements provided the kinetics of the hydrolytic cleavage step. The fluorescent phosphate sensor, MDCC-PBP was used to measure phosphate release kinetics. Phosphate-water oxygen exchange, using (18)O-substituted GTP and inorganic phosphate (P(i)), was used to determine the extent of reversal of the hydrolysis step and of P(i) binding. The data show that neurofibromin and P(i) dissociate from the NF1.Ras.GDP.P(i) complex with identical kinetics, which are 3-fold slower than the preceding cleavage step. A model is presented in which the P(i) release is associated with the change of Ras from "GTP" to "GDP" conformation. In this model, the conformation change on P(i) release causes the large change in affinity of neurofibromin, which then dissociates rapidly.

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Year:  2003        PMID: 12667087     DOI: 10.1021/bi027316z

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  14 in total

1.  CXCL12 alone is insufficient for gliomagenesis in Nf1 mutant mice.

Authors:  Tao Sun; Scott M Gianino; Erin Jackson; David Piwnica-Worms; David H Gutmann; Joshua B Rubin
Journal:  J Neuroimmunol       Date:  2010-07-27       Impact factor: 3.478

2.  Role of hybrid tRNA-binding states in ribosomal translocation.

Authors:  Sarah E Walker; Shinichiro Shoji; Dongli Pan; Barry S Cooperman; Kurt Fredrick
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-30       Impact factor: 11.205

3.  The GAP arginine finger movement into the catalytic site of Ras increases the activation entropy.

Authors:  Carsten Kötting; Angela Kallenbach; Yan Suveyzdis; Alfred Wittinghofer; Klaus Gerwert
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-23       Impact factor: 11.205

Review 4.  Fluorescent labeling and modification of proteins.

Authors:  Christopher P Toseland
Journal:  J Chem Biol       Date:  2013-04-13

5.  Galectin-1 inhibition induces cell apoptosis through dual suppression of CXCR4 and Ras pathways in human malignant peripheral nerve sheath tumors.

Authors:  Tsung-Chieh Shih; Yunpeng Fan; Sophie Kiss; Xiaocen Li; Xiaojun Nicole Deng; Ruiwu Liu; Xiao-Jia Chen; Randy Carney; Amanda Chen; Paramita M Ghosh; Kit S Lam
Journal:  Neuro Oncol       Date:  2019-11-04       Impact factor: 12.300

6.  A phosphoryl transfer intermediate in the GTPase reaction of Ras in complex with its GTPase-activating protein.

Authors:  Carsten Kötting; Marco Blessenohl; Yan Suveyzdis; Roger S Goody; Alfred Wittinghofer; Klaus Gerwert
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-12       Impact factor: 11.205

7.  Real-time NMR study of three small GTPases reveals that fluorescent 2'(3')-O-(N-methylanthraniloyl)-tagged nucleotides alter hydrolysis and exchange kinetics.

Authors:  Mohammad T Mazhab-Jafari; Christopher B Marshall; Matthew Smith; Geneviève M C Gasmi-Seabrook; Vuk Stambolic; Robert Rottapel; Benjamin G Neel; Mitsuhiko Ikura
Journal:  J Biol Chem       Date:  2009-12-14       Impact factor: 5.157

8.  Transition state structures and the roles of catalytic residues in GAP-facilitated GTPase of Ras as elucidated by (18)O kinetic isotope effects.

Authors:  Xinlin Du; Stephen R Sprang
Journal:  Biochemistry       Date:  2009-06-02       Impact factor: 3.162

9.  Uncoupling conformational change from GTP hydrolysis in a heterotrimeric G protein alpha-subunit.

Authors:  Celestine J Thomas; Xinlin Du; PiLong Li; Ying Wang; Elliott M Ross; Stephen R Sprang
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-05       Impact factor: 11.205

10.  ATPase cycle and DNA unwinding kinetics of RecG helicase.

Authors:  Christopher P Toseland; Ben Powell; Martin R Webb
Journal:  PLoS One       Date:  2012-06-06       Impact factor: 3.240

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