Literature DB >> 12665621

alpha-Synuclein maps to a quantitative trait locus for alcohol preference and is differentially expressed in alcohol-preferring and -nonpreferring rats.

Tiebing Liang1, John Spence, Lixiang Liu, Wendy N Strother, Hwai Wen Chang, Julie A Ellison, Lawrence Lumeng, Ting-Kai Li, Tatiana Foroud, Lucinda G Carr.   

Abstract

Total gene expression analysis (TOGA) was used to identify genes that are differentially expressed in brain regions between the alcohol-naive, inbred alcohol-preferring (iP), and -nonpreferring (iNP) rats. alpha-Synuclein, expressed at >2-fold higher levels in the hippocampus of the iP than the iNP rat, was prioritized for further study. In situ hybridization was used to determine specific brain regions and cells expressing alpha-synuclein in the iP and iNP rats. Similar to alpha-synuclein mRNA levels, protein levels in the hippocampus were higher in iP rats than iNP rats. Higher protein levels were also observed in the caudate putamen of iP rats compared with iNP rats. Sequence analysis identified two single nucleotide polymorphisms in the 3' UTR of the cDNA. The polymorphism was used to map the gene, by using recombination-based methods, to chromosome 4, within a quantitative trait locus for alcohol consumption that was identified in the iP and iNP rats. A nucleotide exchange in the iNP 3' UTR reduced expression of the luciferase reporter gene in SK-N-SH neuroblastoma cells. These results suggest that differential expression of the alpha-synuclein gene may contribute to alcohol preference in the iP rats.

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Year:  2003        PMID: 12665621      PMCID: PMC153617          DOI: 10.1073/pnas.0737182100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  43 in total

1.  TOGA: an automated parsing technology for analyzing expression of nearly all genes.

Authors:  J G Sutcliffe; P E Foye; M G Erlander; B S Hilbush; L J Bodzin; J T Durham; K W Hasel
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-29       Impact factor: 11.205

2.  The poly(A)-binding protein and an mRNA stability protein jointly regulate an endoribonuclease activity.

Authors:  Z Wang; M Kiledjian
Journal:  Mol Cell Biol       Date:  2000-09       Impact factor: 4.272

3.  Evidence for a locus on chromosome 1 that influences vulnerability to alcoholism and affective disorder.

Authors:  J I Nurnberger; T Foroud; L Flury; J Su; E T Meyer; K Hu; R Crowe; H Edenberg; A Goate; L Bierut; T Reich; M Schuckit; W Reich
Journal:  Am J Psychiatry       Date:  2001-05       Impact factor: 18.112

4.  Genomic screen for QTLs underlying alcohol consumption in the P and NP rat lines.

Authors:  P Bice; T Foroud; R Bo; P Castelluccio; L Lumeng; T K Li; L G Carr
Journal:  Mamm Genome       Date:  1998-12       Impact factor: 2.957

5.  Human and mouse alpha-synuclein genes: comparative genomic sequence analysis and identification of a novel gene regulatory element.

Authors:  J W Touchman; A Dehejia; O Chiba-Falek; D E Cabin; J R Schwartz; B M Orrison; M H Polymeropoulos; R L Nussbaum
Journal:  Genome Res       Date:  2001-01       Impact factor: 9.043

6.  A major effect QTL determined by multiple genes in epileptic EL mice.

Authors:  M E Legare; F S Bartlett; W N Frankel
Journal:  Genome Res       Date:  2000-01       Impact factor: 9.043

7.  A genome screen of maximum number of drinks as an alcoholism phenotype.

Authors:  N L Saccone; J M Kwon; J Corbett; A Goate; N Rochberg; H J Edenberg; T Foroud; T K Li; H Begleiter; T Reich; J P Rice
Journal:  Am J Med Genet       Date:  2000-10-09

8.  Expression of alpha-synuclein in the human brain: relation to Lewy body disease.

Authors:  K Wirdefeldt; N Bogdanovic; L Westerberg; H Payami; M Schalling; G Murdoch
Journal:  Brain Res Mol Brain Res       Date:  2001-08-15

9.  Alcoholism susceptibility loci: confirmation studies in a replicate sample and further mapping.

Authors:  T Foroud; H J Edenberg; A Goate; J Rice; L Flury; D L Koller; L J Bierut; P M Conneally; J I Nurnberger; K K Bucholz; T K Li; V Hesselbrock; R Crowe; M Schuckit; B Porjesz; H Begleiter; T Reich
Journal:  Alcohol Clin Exp Res       Date:  2000-07       Impact factor: 3.455

10.  Regulatory role of the 3' untranslated region of luteinizing hormone receptor: effect on mRNA stability.

Authors:  A K Nair; K M Menon
Journal:  FEBS Lett       Date:  2000-04-07       Impact factor: 4.124

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  39 in total

1.  Biochemical and morphological consequences of human α-synuclein expression in a mouse α-synuclein null background.

Authors:  Kavita Prasad; Elizabeth Tarasewicz; Pamela A Ohman Strickland; Michael O'Neill; Stephen N Mitchell; Kalpana Merchant; Samnang Tep; Kathryn Hilton; Akash Datwani; Manuel Buttini; Sarah Mueller-Steiner; Eric K Richfield
Journal:  Eur J Neurosci       Date:  2011-01-28       Impact factor: 3.386

2.  The influence of sex and estrous cycle on QTL for emotionality and ethanol consumption.

Authors:  Geison S Izídio; Letícia C Oliveira; Lígia F G Oliveira; Elayne Pereira; Thaize D Wehrmeister; André Ramos
Journal:  Mamm Genome       Date:  2011-04-24       Impact factor: 2.957

Review 3.  Pharmacogenetic studies of alcohol self-administration and withdrawal.

Authors:  John C Crabbe; Tamara J Phillips
Journal:  Psychopharmacology (Berl)       Date:  2003-10-09       Impact factor: 4.530

4.  Applications of a rat multiple tissue gene expression data set.

Authors:  John R Walker; Andrew I Su; David W Self; John B Hogenesch; Hilmar Lapp; Rainer Maier; Daniel Hoyer; Graeme Bilbe
Journal:  Genome Res       Date:  2004-04       Impact factor: 9.043

Review 5.  Functional genomics strategies to identify susceptibility genes and treatment targets in alcohol dependence.

Authors:  Markus Heilig; Wolfgang Sommer
Journal:  Neurotox Res       Date:  2004       Impact factor: 3.911

Review 6.  From QTL to candidate gene: a genetic approach to alcoholism research.

Authors:  John P Spence; Tiebing Liang; Lixiang Liu; Philip L Johnson; Tatiana Foroud; Lucinda G Carr; Anantha Shekhar
Journal:  Curr Drug Abuse Rev       Date:  2009-05

Review 7.  Genetic approaches to addiction: genes and alcohol.

Authors:  Francesca Ducci; David Goldman
Journal:  Addiction       Date:  2008-04-16       Impact factor: 6.526

8.  Gene expression differences in mice divergently selected for methamphetamine sensitivity.

Authors:  Abraham A Palmer; Miguel Verbitsky; Rathi Suresh; Helen M Kamens; Cheryl L Reed; Na Li; Sue Burkhart-Kasch; Carrie S McKinnon; John K Belknap; T Conrad Gilliam; Tamara J Phillips
Journal:  Mamm Genome       Date:  2005-05       Impact factor: 2.957

Review 9.  Animal models for medications development targeting alcohol abuse using selectively bred rat lines: neurobiological and pharmacological validity.

Authors:  Richard L Bell; Helen J K Sable; Giancarlo Colombo; Petri Hyytia; Zachary A Rodd; Lawrence Lumeng
Journal:  Pharmacol Biochem Behav       Date:  2012-07-25       Impact factor: 3.533

10.  Neuropeptide Y receptor genes are associated with alcohol dependence, alcohol withdrawal phenotypes, and cocaine dependence.

Authors:  Leah Wetherill; Marc A Schuckit; Victor Hesselbrock; Xiaoling Xuei; Tiebing Liang; Danielle M Dick; John Kramer; John I Nurnberger; Jay A Tischfield; Bernice Porjesz; Howard J Edenberg; Tatiana Foroud
Journal:  Alcohol Clin Exp Res       Date:  2008-09-25       Impact factor: 3.455

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