Literature DB >> 12662276

Rapid and reliable genotyping of human platelet antigen (HPA)-1, -2, -3, -4, and -5 a/b and Gov a/b by melting curve analysis.

Ingrid Randen1, Kirsten Sørensen, Mette K Killie, Jens Kjeldsen-Kragh.   

Abstract

BACKGROUND: The probability for occurrence of neonatal alloimmune thrombocytopenic purpura (NAITP) depends largely on the frequency of each individual phenotype in various populations. In caucasians, antibodies to human platelet antigen (HPA)-1a are the major cause of neonatal alloimmune thrombocytopenic purpura, whereas in the Japanese population, antibodies to HPA-4b is most frequently involved in NAITP. Conventional PCR techniques for platelet antigen genotyping rely on sequence-specific primers (SSPs) and detection by gel electrophoresis, a method which is laborious and time consuming. New PCR technology, measuring the match of a hybridization probe with its target and thereby allowing simultaneous detection of both alleles, provides an efficient tool for genotyping of the HPA systems. STUDY DESIGN AND METHODS: A total of 105 healthy blood donors were genotyped for HPA-1, -2, -3, -4, and -5 a/b and Gov a/b with new primers and probes designed for mutation detection by melting curve analysis (using LightCycler technology). Donor DNA was independently genotyped by an allele-specific assay, using SSPs, in a reference laboratory.
RESULTS: There was full concordance between the two genotyping methods, and genotype frequencies were comparable with previous studies in caucasians.
CONCLUSION: We present rapid and reliable detection systems for HPA-1, -2, -3, -4, and -5 a/b and Gov a/b based on mutation detection of both alleles simultaneously by melting curve analysis. As the Gov system has been reported to have similar frequency of involvement in alloimmune thrombocytopenia as HPA-5, the opportunity for genotyping should aid the diagnosis of such patients.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12662276     DOI: 10.1046/j.1537-2995.2003.00354.x

Source DB:  PubMed          Journal:  Transfusion        ISSN: 0041-1132            Impact factor:   3.157


  4 in total

1.  Genotyping of human platelet antigens 1 to 6 and 15 by high-resolution amplicon melting and conventional hybridization probes.

Authors:  Michael Liew; Lesa Nelson; Rebecca Margraf; Sheri Mitchell; Maria Erali; Rong Mao; Elaine Lyon; Carl Wittwer
Journal:  J Mol Diagn       Date:  2006-02       Impact factor: 5.568

2.  Genetic polymorphisms of human platelet antigens-1 to -6, and -15 in the Malaysian population.

Authors:  Jia-Yi Tan; Lay-Hoong Lian; Veera Sekaran Nadarajan
Journal:  Blood Transfus       Date:  2012-05-04       Impact factor: 3.443

3.  Modification of solid phase red cell adherence assay for the detection of platelet antibodies in patients with thrombocytopenia.

Authors:  Preeyanat Vongchan; Weerasak Nawarawong; Robert J Linhardt
Journal:  Am J Clin Pathol       Date:  2008-09       Impact factor: 2.493

4.  Human platelet antigen 1-6, 9 and 15 in the Iranian population: An anthropological genetic analysis.

Authors:  Mohammad Hossein Kazemi; Farideh Malakootikhah; Zahra Momeni-Varposhti; Reza Falak; Ali-Akbar Delbandi; Nader Tajik
Journal:  Sci Rep       Date:  2020-05-04       Impact factor: 4.379

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.