Literature DB >> 12660999

Conserved protein YecM from Escherichia coli shows structural homology to metal-binding isomerases and oxygenases.

Rong-Guang Zhang1, Norma Duke, Roman Laskowski, Elena Evdokimova, Tatiana Skarina, Aled Edwards, Andrzej Joachimiak, Alexei Savchenko.   

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Year:  2003        PMID： 12660999      PMCID： PMC2792024          DOI： 10.1002/prot.10307

Source DB:  PubMed          Journal:  Proteins        ISSN： 0887-3585


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  11 in total

1.  Structure of yeast poly(A) polymerase alone and in complex with 3'-dATP.

Authors:  J Bard; A M Zhelkovsky; S Helmling; T N Earnest; C L Moore; A Bohm
Journal:  Science       Date:  2000-08-25       Impact factor: 47.728

2.  Improved tools for biological sequence comparison.

Authors:  W R Pearson; D J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

3.  Protein structure comparison by alignment of distance matrices.

Authors:  L Holm; C Sander
Journal:  J Mol Biol       Date:  1993-09-05       Impact factor: 5.469

4.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

5.  An archetypical extradiol-cleaving catecholic dioxygenase: the crystal structure of catechol 2,3-dioxygenase (metapyrocatechase) from Ppseudomonas putida mt-2.

Authors:  A Kita; S Kita; I Fujisawa; K Inaka; T Ishida; K Horiike; M Nozaki; K Miki
Journal:  Structure       Date:  1999-01-15       Impact factor: 5.006

6.  Crystal structures of the transposon Tn5-carried bleomycin resistance determinant uncomplexed and complexed with bleomycin.

Authors:  M Maruyama; T Kumagai; Y Matoba; M Hayashida; T Fujii; Y Hata; M Sugiyama
Journal:  J Biol Chem       Date:  2000-12-29       Impact factor: 5.157

7.  Reaction mechanism of glyoxalase I explored by an X-ray crystallographic analysis of the human enzyme in complex with a transition state analogue.

Authors:  A D Cameron; M Ridderström; B Olin; M J Kavarana; D J Creighton; B Mannervik
Journal:  Biochemistry       Date:  1999-10-12       Impact factor: 3.162

8.  Crystal structure of Pseudomonas fluorescens 4-hydroxyphenylpyruvate dioxygenase: an enzyme involved in the tyrosine degradation pathway.

Authors:  L Serre; A Sailland; D Sy; P Boudec; A Rolland; E Pebay-Peyroula; C Cohen-Addad
Journal:  Structure       Date:  1999-08-15       Impact factor: 5.006

9.  Structure of Thermotoga maritima stationary phase survival protein SurE: a novel acid phosphatase.

Authors:  R G Zhang; T Skarina; J E Katz; S Beasley; A Khachatryan; S Vyas; C H Arrowsmith; S Clarke; A Edwards; A Joachimiak; A Savchenko
Journal:  Structure       Date:  2001-11       Impact factor: 5.006

10.  Crystal structure of the biphenyl-cleaving extradiol dioxygenase from a PCB-degrading pseudomonad.

Authors:  S Han; L D Eltis; K N Timmis; S W Muchmore; J T Bolin
Journal:  Science       Date:  1995-11-10       Impact factor: 47.728
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  3 in total

1.  Protein surface analysis for function annotation in high-throughput structural genomics pipeline.

Authors:  T Andrew Binkowski; Andrzej Joachimiak; Jie Liang
Journal:  Protein Sci       Date:  2005-12       Impact factor: 6.725

Review 2.  Chapter 4. Predicting and characterizing protein functions through matching geometric and evolutionary patterns of binding surfaces.

Authors:  Jie Liang; Yan-Yuan Tseng; Joseph Dundas; T Andrew Binkowski; Andrzej Joachimiak; Zheng Ouyang; Larisa Adamian
Journal:  Adv Protein Chem Struct Biol       Date:  2009-02-26       Impact factor: 3.507

3.  MicL, a new σE-dependent sRNA, combats envelope stress by repressing synthesis of Lpp, the major outer membrane lipoprotein.

Authors:  Monica S Guo; Taylor B Updegrove; Emily B Gogol; Svetlana A Shabalina; Carol A Gross; Gisela Storz
Journal:  Genes Dev       Date:  2014-07-15       Impact factor: 11.361
  3 in total

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