Literature DB >> 12649324

Synthetic modeling of zinc thiolates: quantitative assessment of hydrogen bonding in modulating sulfur alkylation rates.

Show-Jen Chiou1, Charles G Riordan, Arnold L Rheingold.   

Abstract

A series of mononuclear zinc thiolate complexes have been prepared and fully characterized. The reactions of the complexes with alkyl halides, leading to zinc halides and the corresponding thioethers, have been examined by kinetic methods. In toluene, the reactions obey a second-order rate law displaying activation parameters consistent with a S(N)2 attack of the zinc-bound thiolate on the carbon electrophile. Intramolecular hydrogen bonding of an amide NH to the thiolate sulfur reduces the nucleophilicity and consequently, the rate of alkylation more than 30-fold at 25 degrees C. The H-bonding shows an inverse HD isotope effect of 0.33 (60 degrees C) ascribed to differential H-bonding for the two isotopomers due to zero point energy differences. These model studies provide quantitative evaluation of H-bonding on reaction rates relevant to zinc thiol-activating proteins.

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Year:  2003        PMID: 12649324      PMCID: PMC152984          DOI: 10.1073/pnas.0637221100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  23 in total

Review 1.  Zinc-catalyzed sulfur alkyation:insights from protein farnesyltransferase.

Authors:  K E Hightower; C A Fierke
Journal:  Curr Opin Chem Biol       Date:  1999-04       Impact factor: 8.822

2.  Synthesis and characterization of novel mononuclear cadmium thiolate complexes in a sulfur-rich environment.

Authors:  Selma Bakbak; Christopher D Incarvito; Arnold L Rheingold; Daniel Rabinovich
Journal:  Inorg Chem       Date:  2002-02-25       Impact factor: 5.165

Review 3.  Lessons from zinc-binding peptides.

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Journal:  Annu Rev Biophys Biomol Struct       Date:  1997

4.  Methylation of neutral pseudotetrahedral zinc thiolate complexes: model reactions for alkyl group transfer to sulfur by zinc-containing enzymes.

Authors:  C R Warthen; B S Hammes; C J Carrano; D C Crans
Journal:  J Biol Inorg Chem       Date:  2001-01       Impact factor: 3.358

5.  Discontinuum between a thiolate and a thiol ligand.

Authors:  Danny G McGuire; Masood A Khan; Michael T Ashby
Journal:  Inorg Chem       Date:  2002-04-22       Impact factor: 5.165

6.  Methylation of Tethered Thiolates in [(bme-daco)Zn](2) and [(bme-daco)Cd](2) as a Model of Zinc Sulfur-Methylation Proteins.

Authors:  Craig A. Grapperhaus; Thawatchai Tuntulani; Joseph H. Reibenspies; Marcetta Y. Darensbourg
Journal:  Inorg Chem       Date:  1998-08-10       Impact factor: 5.165

7.  Novel Rubredoxin Model Tetrathiolato Iron(II) and Cobalt(II) Complexes Containing Intramolecular Single and Double NH.S Hydrogen Bonds.

Authors:  Satoshi Takamizawa; Norikazu Ueyama; Akira Nakamura
Journal:  Inorg Chem       Date:  1998-01-12       Impact factor: 5.165

8.  Kinetic and microcalorimetric analysis of substrate and cofactor interactions in epoxyalkane:CoM transferase, a zinc-dependent epoxidase.

Authors:  Jonathan G Krum; Heather Ellsworth; Ryan R Sargeant; Gregory Rich; Scott A Ensign
Journal:  Biochemistry       Date:  2002-04-16       Impact factor: 3.162

9.  Functional modeling of cobalamine-independent methionine synthase with pyrazolylborate-zinc-thiolate complexes.

Authors:  U Brand; M Rombach; J Seebacher; H Vahrenkamp
Journal:  Inorg Chem       Date:  2001-11-19       Impact factor: 5.165

10.  Characterization of the zinc sites in cobalamin-independent and cobalamin-dependent methionine synthase using zinc and selenium X-ray absorption spectroscopy.

Authors:  K Peariso; Z S Zhou; A E Smith; R G Matthews; J E Penner-Hahn
Journal:  Biochemistry       Date:  2001-01-30       Impact factor: 3.162

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  13 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-25       Impact factor: 11.205

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Authors:  Yi Yu; Qi Zhang; Wilfred A van der Donk
Journal:  Protein Sci       Date:  2013-09-18       Impact factor: 6.725

Review 3.  Mechanistic Understanding of Lanthipeptide Biosynthetic Enzymes.

Authors:  Lindsay M Repka; Jonathan R Chekan; Satish K Nair; Wilfred A van der Donk
Journal:  Chem Rev       Date:  2017-01-30       Impact factor: 60.622

4.  Synthetic analogs for evaluating the influence of N-H...S hydrogen bonds on the formation of thioester in acetyl coenzyme A synthase.

Authors:  Piyal W G Ariyananda; Matthew T Kieber-Emmons; Glenn P A Yap; Charles G Riordan
Journal:  Dalton Trans       Date:  2009-04-27       Impact factor: 4.390

5.  Coordination chemistry of poly(thioether)borate ligands.

Authors:  Charles G Riordan
Journal:  Coord Chem Rev       Date:  2010-08-01       Impact factor: 22.315

6.  Anisotropic Fermi couplings due to large unquenched orbital angular momentum: Q-band (1)H, (14)N, and (11)B ENDOR of bis(trispyrazolylborate) cobalt(II).

Authors:  William K Myers; Charles P Scholes; David L Tierney
Journal:  J Am Chem Soc       Date:  2009-08-05       Impact factor: 15.419

7.  Design, syntheses, and characterization of dioxo-molybdenum(VI) complexes with thiolate ligands: effects of intraligand NH...S hydrogen bonding.

Authors:  Raghvendra S Sengar; Jonathan J Miller; Partha Basu
Journal:  Dalton Trans       Date:  2008-03-27       Impact factor: 4.390

8.  Applications of Tripodal [S(3)] and [Se(3)] L(2)X Donor Ligands to Zinc, Cadmium and Mercury Chemistry: Organometallic and Bioinorganic Perspectives.

Authors:  Gerard Parkin
Journal:  New J Chem       Date:  2007       Impact factor: 3.591

9.  Structurally Modelling the 2-His-1-Carboxylate Facial Triad with a Bulky N,N,O Phenolate Ligand.

Authors:  Emily C Monkcom; Daniël de Bruin; Annemiek J de Vries; Martin Lutz; Shengfa Ye; Robertus J M Klein Gebbink
Journal:  Chemistry       Date:  2021-02-24       Impact factor: 5.236

10.  Structural characterization of four prochlorosins: a novel class of lantipeptides produced by planktonic marine cyanobacteria.

Authors:  Weixin Tang; Wilfred A van der Donk
Journal:  Biochemistry       Date:  2012-05-17       Impact factor: 3.162

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