Literature DB >> 12646369

Group additivity schemes for the calculation of the partial molar heat capacities and volumes of unfolded proteins in aqueous solution.

Gavin R Hedwig1, Hans-Jürgen Hinz.   

Abstract

A critical review is given of the present state of group additivity schemes for the calculation of partial molar volumes and heat capacities of unfolded proteins. The comparison between the experimental values and the predictions based on the different models shows clearly that only the peptide-based additivity scheme represents properly both the absolute values and the temperature dependence of these thermodynamic quantities.

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Year:  2003        PMID: 12646369     DOI: 10.1016/s0301-4622(02)00284-3

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  8 in total

1.  Network rigidity at finite temperature: relationships between thermodynamic stability, the nonadditivity of entropy, and cooperativity in molecular systems.

Authors:  Donald J Jacobs; S Dallakyan; G G Wood; A Heckathorne
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2003-12-31

2.  Elucidating protein thermodynamics from the three-dimensional structure of the native state using network rigidity.

Authors:  Donald J Jacobs; Sargis Dallakyan
Journal:  Biophys J       Date:  2004-11-12       Impact factor: 4.033

3.  Conserved quantitative stability/flexibility relationships (QSFR) in an orthologous RNase H pair.

Authors:  Dennis R Livesay; Donald J Jacobs
Journal:  Proteins       Date:  2006-01-01

4.  Elucidating quantitative stability/flexibility relationships within thioredoxin and its fragments using a distance constraint model.

Authors:  Donald J Jacobs; Dennis R Livesay; Jeremy Hules; Maria Luisa Tasayco
Journal:  J Mol Biol       Date:  2006-02-24       Impact factor: 5.469

5.  Spontaneous drying of non-polar deep-cavity cavitand pockets in aqueous solution.

Authors:  J Wesley Barnett; Matthew R Sullivan; Joshua A Long; Du Tang; Thong Nguyen; Dor Ben-Amotz; Bruce C Gibb; Henry S Ashbaugh
Journal:  Nat Chem       Date:  2020-05-18       Impact factor: 24.427

6.  Molecular determinant of the effects of hydrostatic pressure on protein folding stability.

Authors:  Calvin R Chen; George I Makhatadze
Journal:  Nat Commun       Date:  2017-02-07       Impact factor: 14.919

7.  Hydrogen bond networks determine emergent mechanical and thermodynamic properties across a protein family.

Authors:  Dennis R Livesay; Dang H Huynh; Sargis Dallakyan; Donald J Jacobs
Journal:  Chem Cent J       Date:  2008-08-12       Impact factor: 4.215

8.  Critical role of γ-phosphate in structural transition of Na,K-ATPase upon ATP binding.

Authors:  Irina Yu Petrushanko; Vladimir A Mitkevich; Anastasia A Anashkina; Elizaveta A Klimanova; Elena A Dergousova; Olga D Lopina; Alexander A Makarov
Journal:  Sci Rep       Date:  2014-06-04       Impact factor: 4.379

  8 in total

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