Literature DB >> 12642066

Problems of reporting genetic associations with complex outcomes.

Helen M Colhoun1, Paul M McKeigue, George Davey Smith.   

Abstract

Inability to replicate many results has led to increasing scepticism about the value of simple association study designs for detection of genetic variants contributing to common complex traits. Much attention has been drawn to the problems that might, in theory, bedevil this approach, including confounding from population structure, misclassification of outcome, and allelic heterogeneity. Other researchers have argued that absence of replication may indicate true heterogeneity in gene-disease associations. We suggest that the most important factors underlying inability to replicate these associations are publication bias, failure to attribute results to chance, and inadequate sample sizes, problems that are all rectifiable. Without changes to present practice, we risk wastage of scientific effort and rejection of a potentially useful research strategy.

Mesh:

Year:  2003        PMID: 12642066     DOI: 10.1016/s0140-6736(03)12715-8

Source DB:  PubMed          Journal:  Lancet        ISSN: 0140-6736            Impact factor:   79.321


  306 in total

1.  Freely associating with chemokine receptor 2 polymorphisms and atherosclerosis.

Authors:  F C Luft
Journal:  J Mol Med (Berl)       Date:  2003-06       Impact factor: 4.599

2.  Control of confounding of genetic associations in stratified populations.

Authors:  Clive J Hoggart; Eteban J Parra; Mark D Shriver; Carolina Bonilla; Rick A Kittles; David G Clayton; Paul M McKeigue
Journal:  Am J Hum Genet       Date:  2003-06       Impact factor: 11.025

3.  Jesting Pilate, genetic case-control association studies, and Heart.

Authors:  D Crossman; H Watkins
Journal:  Heart       Date:  2004-08       Impact factor: 5.994

4.  The future of association studies: gene-based analysis and replication.

Authors:  Benjamin M Neale; Pak C Sham
Journal:  Am J Hum Genet       Date:  2004-07-22       Impact factor: 11.025

5.  Suggestive evidence of association of C-159T functional polymorphism of the CD14 gene with atopic asthma in northern and northwestern Indian populations.

Authors:  Mamta Sharma; Jyotsna Batra; U Mabalirajan; Sangeeta Goswami; Dipyaman Ganguly; Brajen Lahkar; N K Bhatia; Amrendra Kumar; Balaram Ghosh
Journal:  Immunogenetics       Date:  2004-09-18       Impact factor: 2.846

6.  Assessing the probability that a positive report is false: an approach for molecular epidemiology studies.

Authors:  Sholom Wacholder; Stephen Chanock; Montserrat Garcia-Closas; Laure El Ghormli; Nathaniel Rothman
Journal:  J Natl Cancer Inst       Date:  2004-03-17       Impact factor: 13.506

Review 7.  Genetics of liver disease: immunogenetics and disease pathogenesis.

Authors:  P T Donaldson
Journal:  Gut       Date:  2004-04       Impact factor: 23.059

8.  Sequence variations of the human MPDZ gene and association with alcoholism in subjects with European ancestry.

Authors:  Victor M Karpyak; Jeong-Hyun Kim; Joanna M Biernacka; Eric D Wieben; David A Mrazek; John L Black; Doo-Sup Choi
Journal:  Alcohol Clin Exp Res       Date:  2009-01-21       Impact factor: 3.455

9.  A genome-wide analysis identifies genetic variants in the RELN gene associated with otosclerosis.

Authors:  Isabelle Schrauwen; Megan Ealy; Matthew J Huentelman; Melissa Thys; Nils Homer; Kathleen Vanderstraeten; Erik Fransen; Jason J Corneveaux; David W Craig; Mireille Claustres; Cor W R J Cremers; Ingeborg Dhooge; Paul Van de Heyning; Robert Vincent; Erwin Offeciers; Richard J H Smith; Guy Van Camp
Journal:  Am J Hum Genet       Date:  2009-02-19       Impact factor: 11.025

10.  A functional polymorphism in the interleukin-1 receptor-1 gene is associated with increased risk of Helicobacter pylori infection but not with gastric cancer.

Authors:  Steve Hartland; Julia L Newton; S Michael Griffin; Pete T Donaldson
Journal:  Dig Dis Sci       Date:  2004-09       Impact factor: 3.199

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