Literature DB >> 12624207

Identification of the essential histidine residue for high-affinity binding of AlbA protein to albicidin antibiotics.

Li-Xing Weng1, Jin-Ling Xu1, Qi Li1, Robert G Birch2, Lian-Hui Zhang3,1.   

Abstract

The albA gene from Klebsiella oxytoca encodes a protein that binds albicidin phytotoxins and antibiotics with high affinity. Previously, it has been shown that shifting pH from 6 to 4 reduces binding activity of AlbA by about 30%, indicating that histidine residues might be involved in substrate binding. In this study, molecular analysis of the albA coding region revealed sequence discrepancies with the albA sequence reported previously, which were probably due to sequencing errors. The albA gene was subsequently cloned from K. oxytoca ATCC 13182(T) to establish the revised sequence. Biochemical and molecular approaches were used to determine the functional role of four histidine residues (His(78), His(125), His(141) and His(189)) in the corrected sequence for AlbA. Treatment of AlbA with diethyl pyrocarbonate (DEPC), a histidine-specific alkylating reagent, reduced binding activity by about 95 %. DEPC treatment increased absorbance at 240-244 nm by an amount indicating conversion to N-carbethoxyhistidine of a single histidine residue per AlbA molecule. Pretreatment with albicidin protected AlbA against modification by DEPC, with a 1 : 1 molar ratio of albicidin to the protected histidine residues. Based on protein secondary structure and amino acid surface probability indices, it is predicted that His(125) might be the residue required for albicidin binding. Mutation of His(125) to either alanine or leucine resulted in about 32 % loss of binding activity, and deletion of His(125) totally abolished binding activity. Mutation of His(125) to arginine and tyrosine had no effect. These results indicate that His(125) plays a key role either in an electrostatic interaction between AlbA and albicidin or in the conformational dynamics of the albicidin-binding site.

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Year:  2003        PMID: 12624207     DOI: 10.1099/mic.0.25942-0

Source DB:  PubMed          Journal:  Microbiology        ISSN: 1350-0872            Impact factor:   2.777


  4 in total

1.  Functional characterization of 5-oxoproline transport via SLC16A1/MCT1.

Authors:  Shotaro Sasaki; Yuya Futagi; Masaki Kobayashi; Jiro Ogura; Ken Iseki
Journal:  J Biol Chem       Date:  2014-11-04       Impact factor: 5.157

2.  Molecular and conformational basis of a specific and high-affinity interaction between AlbA and albicidin phytotoxin.

Authors:  Li-Xing Weng; Lian-Hui Wang; Jin-Ling Xu; Ji-En Wu; Qi Li; Lian-Hui Zhang
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

3.  Comparative analysis of ABCB1 reveals novel structural and functional conservation between monocots and dicots.

Authors:  Amandeep K Dhaliwal; Amita Mohan; Kulvinder S Gill
Journal:  Front Plant Sci       Date:  2014-11-26       Impact factor: 5.753

4.  Molecular insights into antibiotic resistance - how a binding protein traps albicidin.

Authors:  Lida Rostock; Ronja Driller; Stefan Grätz; Dennis Kerwat; Leonard von Eckardstein; Daniel Petras; Maria Kunert; Claudia Alings; Franz-Josef Schmitt; Thomas Friedrich; Markus C Wahl; Bernhard Loll; Andi Mainz; Roderich D Süssmuth
Journal:  Nat Commun       Date:  2018-08-06       Impact factor: 14.919

  4 in total

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