Literature DB >> 12620965

cDNA microarray analysis of individual Duchenne muscular dystrophy patients.

Satoru Noguchi1, Toshifumi Tsukahara, Masako Fujita, Rumi Kurokawa, Masaji Tachikawa, Tatsushi Toda, Atsumi Tsujimoto, Kiichi Arahata, Ichizo Nishino.   

Abstract

We have developed a novel cDNA microarray encompassing 3500 genes expressed in skeletal muscle. With this system, we have performed the first study of gene expression in samples from individual patients. We analyzed muscle specimen from individuals with Duchenne muscular dystrophy to identify differences among patients. Among the variably expressed genes, we focused on the expression of the genes encoding HLA-related proteins, myosin light chains and troponin Ts as markers of muscle necrosis and regeneration. The expression patterns of these genes correlated with the severity of dystrophic changes on histological examination. Our cDNA microarray provides a new tool to investigate molecular muscle pathology.

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Year:  2003        PMID: 12620965

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  23 in total

1.  Genome-scale design of PCR primers and long oligomers for DNA microarrays.

Authors:  Stefan A Haas; Marc Hild; Anthony P H Wright; Torsten Hain; Driss Talibi; Martin Vingron
Journal:  Nucleic Acids Res       Date:  2003-10-01       Impact factor: 16.971

Review 2.  Muscle plasticity and high throughput gene expression studies.

Authors:  Carlo Reggiani; Geertruuy Te Kronnie
Journal:  J Muscle Res Cell Motil       Date:  2004       Impact factor: 2.698

3.  On marathons and Sprints: an integrated quantitative proteomics and transcriptomics analysis of differences between slow and fast muscle fibers.

Authors:  Hannes C A Drexler; Aaron Ruhs; Anne Konzer; Luca Mendler; Mark Bruckskotten; Mario Looso; Stefan Günther; Thomas Boettger; Marcus Krüger; Thomas Braun
Journal:  Mol Cell Proteomics       Date:  2011-12-30       Impact factor: 5.911

4.  Muscle-specific expression of insulin-like growth factor 1 improves outcome in Lama2Dy-w mice, a model for congenital muscular dystrophy type 1A.

Authors:  Ajay Kumar; Jenny Yamauchi; Tanya Girgenrath; Mahasweta Girgenrath
Journal:  Hum Mol Genet       Date:  2011-03-26       Impact factor: 6.150

5.  A new technique for the quantitative assessment of 8-oxoguanine in nuclear DNA as a marker of oxidative stress. Application to dystrophin-deficient DMD skeletal muscles.

Authors:  Yoshiko Nakae; Peter J Stoward; Ivan A Bespalov; Robert J Melamede; Susan S Wallace
Journal:  Histochem Cell Biol       Date:  2005-10-28       Impact factor: 4.304

6.  C3KO mouse expression analysis: downregulation of the muscular dystrophy Ky protein and alterations in muscle aging.

Authors:  Oihane Jaka; Irina Kramerova; Margarita Azpitarte; Adolfo López de Munain; Melissa Spencer; Amets Sáenz
Journal:  Neurogenetics       Date:  2012-07-22       Impact factor: 2.660

7.  Transcriptomic analysis of dystrophin RNAi knockdown reveals a central role for dystrophin in muscle differentiation and contractile apparatus organization.

Authors:  Mohammad M Ghahramani Seno; Capucine Trollet; Takis Athanasopoulos; Ian R Graham; Pingzhao Hu; George Dickson
Journal:  BMC Genomics       Date:  2010-06-01       Impact factor: 3.969

8.  Comparative gene expression profiling between human cultured myotubes and skeletal muscle tissue.

Authors:  Frederic Raymond; Sylviane Métairon; Martin Kussmann; Jaume Colomer; Andres Nascimento; Emma Mormeneo; Cèlia García-Martínez; Anna M Gómez-Foix
Journal:  BMC Genomics       Date:  2010-02-22       Impact factor: 3.969

Review 9.  Therapeutics for Duchenne muscular dystrophy: current approaches and future directions.

Authors:  Sasha Bogdanovich; Kelly J Perkins; Thomas O B Krag; Tejvir S Khurana
Journal:  J Mol Med (Berl)       Date:  2003-12-12       Impact factor: 4.599

10.  Secreted protein acidic and rich in cysteine (SPARC) in human skeletal muscle.

Authors:  Louise H Jørgensen; Stine J Petersson; Jeeva Sellathurai; Ditte C Andersen; Susanne Thayssen; Dorte J Sant; Charlotte H Jensen; Henrik D Schrøder
Journal:  J Histochem Cytochem       Date:  2008-09-15       Impact factor: 2.479

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