Literature DB >> 12620848

Transcriptional cross-regulation of the catechol and protocatechuate branches of the beta-ketoadipate pathway contributes to carbon source-dependent expression of the Acinetobacter sp. strain ADP1 pobA gene.

Patricia C Brzostowicz1, Andrew B Reams, Todd J Clark, Ellen L Neidle.   

Abstract

Transcriptional control of carbon source preferences by Acinetobacter sp. strain ADP1 was assessed with a pobA::lacZ fusion during growth on alternative substrates. The pobA-encoded enzyme catalyzes the first step in the degradation of 4-hydroxybenzoate, a compound consumed rapidly as a sole carbon source. If additional aromatic carbon sources are available, 4-hydroxybenzoate consumption is inhibited by unknown mechanisms. As reported here, during growth on aromatic substrates, pobA was not expressed despite the presence of 4-hydroxybenzoate, an inducer that normally causes the PobR regulator to activate pobA transcription. Growth on organic acids such as succinate, fumarate, and acetate allowed higher levels of pobA expression. In each case, pobA expression increased at the end of the exponential growth phase. Complex transcriptional regulation controlled 4-hydroxybenzoate catabolism in multisubstrate environments. Additional studies focused on the wild-type preference for benzoate consumption prior to 4-hydroxybenzoate consumption. These compounds are degraded via the catechol and protocatechuate branches of the beta-ketoadipate pathway, respectively. Here, mutants were characterized that degraded benzoate and 4-hydroxybenzoate concurrently. These mutants lacked the BenM and CatM transcriptional regulators that normally activate genes for benzoate catabolism. A model is presented in which BenM and CatM prevent pobA expression indirectly during growth on benzoate. These regulators may affect pobA expression by lowering the PcaK-mediated uptake of 4-hydroxybenzoate. Consistent with this model, BenM and CatM bound in vitro to an operator-promoter fragment controlling the expression of several pca genes, including pcaK. These studies provide the first direct evidence of transcriptional cross-regulation between the distinct but analogous branches of the beta-ketoadipate pathway.

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Year:  2003        PMID: 12620848      PMCID: PMC150108          DOI: 10.1128/AEM.69.3.1598-1606.2003

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  35 in total

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Authors:  L Petruschka; G Burchhardt; C Müller; C Weihe; H Herrmann
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2.  Synergistic transcriptional activation by one regulatory protein in response to two metabolites.

Authors:  Becky M Bundy; Lauren S Collier; Timothy R Hoover; Ellen L Neidle
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-28       Impact factor: 11.205

3.  Inactivation of cytochrome o ubiquinol oxidase relieves catabolic repression of the Pseudomonas putida GPo1 alkane degradation pathway.

Authors:  M Alejandro Dinamarca; Ana Ruiz-Manzano; Fernando Rojo
Journal:  J Bacteriol       Date:  2002-07       Impact factor: 3.490

4.  Differential DNA binding of transcriptional regulator PcaU from Acinetobacter sp. strain ADP1.

Authors:  Roland Popp; Tobias Kohl; Patricia Patz; Gaby Trautwein; Ulrike Gerischer
Journal:  J Bacteriol       Date:  2002-04       Impact factor: 3.490

5.  Role of the crc gene in catabolic repression of the Pseudomonas putida GPo1 alkane degradation pathway.

Authors:  L Yuste; F Rojo
Journal:  J Bacteriol       Date:  2001-11       Impact factor: 3.490

6.  Cloning and expression of Acinetobacter calcoaceticus catBCDE genes in Pseudomonas putida and Escherichia coli.

Authors:  M S Shanley; E L Neidle; R E Parales; L N Ornston
Journal:  J Bacteriol       Date:  1986-02       Impact factor: 3.490

7.  The benPK operon, proposed to play a role in transport, is part of a regulon for benzoate catabolism in Acinetobacter sp. strain ADP1.

Authors:  Todd J Clark; Cory Momany; Ellen L Neidle
Journal:  Microbiology (Reading)       Date:  2002-04       Impact factor: 2.777

8.  Genome plasticity in Acinetobacter: new degradative capabilities acquired by the spontaneous amplification of large chromosomal segments.

Authors:  Andrew B Reams; Ellen L Neidle
Journal:  Mol Microbiol       Date:  2003-03       Impact factor: 3.501

9.  Multiple operons connected with catabolism of aromatic compounds in Acinetobacter sp. strain ADP1 are under carbon catabolite repression.

Authors:  Süreyya Dal; Iris Steiner; Ulrike Gerischer
Journal:  J Mol Microbiol Biotechnol       Date:  2002-07

10.  Transformation of Acinetobacter calco-aceticus (Bacterium anitratum).

Authors:  E Juni; A Janik
Journal:  J Bacteriol       Date:  1969-04       Impact factor: 3.490

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  21 in total

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Authors:  David Tropel; Jan Roelof van der Meer
Journal:  Microbiol Mol Biol Rev       Date:  2004-09       Impact factor: 11.056

2.  Diverse organization of genes of the beta-ketoadipate pathway in members of the marine Roseobacter lineage.

Authors:  Alison Buchan; Ellen L Neidle; Mary Ann Moran
Journal:  Appl Environ Microbiol       Date:  2004-03       Impact factor: 4.792

3.  Bacterial degradation of benzoate: cross-regulation between aerobic and anaerobic pathways.

Authors:  J Andrés Valderrama; Gonzalo Durante-Rodríguez; Blas Blázquez; José Luis García; Manuel Carmona; Eduardo Díaz
Journal:  J Biol Chem       Date:  2012-02-02       Impact factor: 5.157

4.  Multiple-level regulation of genes for protocatechuate degradation in Acinetobacter baylyi includes cross-regulation.

Authors:  Simone Yasmin Siehler; Süreyya Dal; Rita Fischer; Patricia Patz; Ulrike Gerischer
Journal:  Appl Environ Microbiol       Date:  2006-11-03       Impact factor: 4.792

5.  Oligomerization of BenM, a LysR-type transcriptional regulator: structural basis for the aggregation of proteins in this family.

Authors:  Obidimma C Ezezika; Sandra Haddad; Ellen L Neidle; Cory Momany
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-04-28

6.  Simultaneous catabolism of plant-derived aromatic compounds results in enhanced growth for members of the Roseobacter lineage.

Authors:  Christopher A Gulvik; Alison Buchan
Journal:  Appl Environ Microbiol       Date:  2013-04-05       Impact factor: 4.792

7.  Catabolism of benzoate and phthalate in Rhodococcus sp. strain RHA1: redundancies and convergence.

Authors:  Marianna A Patrauchan; Christine Florizone; Manisha Dosanjh; William W Mohn; Julian Davies; Lindsay D Eltis
Journal:  J Bacteriol       Date:  2005-06       Impact factor: 3.490

8.  PcaO positively regulates pcaHG of the beta-ketoadipate pathway in Corynebacterium glutamicum.

Authors:  Ke-Xin Zhao; Yan Huang; Xi Chen; Nan-Xi Wang; Shuang-Jiang Liu
Journal:  J Bacteriol       Date:  2010-01-15       Impact factor: 3.490

9.  Role of Acinetobacter baylyi Crc in catabolite repression of enzymes for aromatic compound catabolism.

Authors:  Tina Zimmermann; Tobias Sorg; Simone Yasmin Siehler; Ulrike Gerischer
Journal:  J Bacteriol       Date:  2009-02-06       Impact factor: 3.490

10.  CatM regulation of the benABCDE operon: functional divergence of two LysR-type paralogs in Acinetobacter baylyi ADP1.

Authors:  Obidimma C Ezezika; Lauren S Collier-Hyams; Haley A Dale; Andrew C Burk; Ellen L Neidle
Journal:  Appl Environ Microbiol       Date:  2006-03       Impact factor: 4.792

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